Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq13 111 1e-19 seq21 107 2e-18 seq8 105 6e-18 seq7 102 7e-17 seq20 84.2 2e-11 >seq13 Length=81577475 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||||||| | ||| | ||| |||||||||||| ||||| || | | Sbjct 45553214 CCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 45553273 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 45553274 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 45553333 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||| Sbjct 45553334 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 45553393 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || || || | |||||||| || ||||||||| || Sbjct 45553394 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 45553444 >seq21 Length=146407008 Score = 107 bits (118), Expect = 2e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||| | | ||| | ||| |||||| ||||| ||||| || | | Sbjct 111222762 CCACCACGAAGTCTCAACNCAAGATGAAGAGTAGACTCCTTNTGAATATTGTAGTCAGAC 111222703 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 111222702 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 111222643 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | | | || | ||| ||| Sbjct 111222642 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCAACC 111222583 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||| | | ||||||||| || ||||||||| || Sbjct 111222582 TCGAGGGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCATTTTG 111222532 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||| | ||||||| ||||| | ||| |||||||||||||||| | || | | Sbjct 1220618 CCACCACAAAGTCTCAACAAAAAATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGAC 1220559 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| |||| || ||||| |||| | ||||| || | |||| Sbjct 1220558 AAAGTACGTCCATCTTCCAGTTGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 1220499 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | |||| || | ||| ||| Sbjct 1220498 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACC 1220439 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||| | | ||||||||||| |||||||| || Sbjct 1220438 TCAAGGGTGATAGTCTTCCCCCTTAGGGTTTTCACAAAAGTCTGCATTTTG 1220388 >seq8 Length=70300957 Score = 105 bits (116), Expect = 6e-18 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 14508596 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 14508655 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | |||| || ||||| ||| ||| || ||| | | | Sbjct 14508656 GATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTYACATT 14508715 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 14508716 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 14508775 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 14508776 GAAGATCTGCAT 14508787 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 14508368 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 14508427 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || || || || |||||| ||||| | | Sbjct 14508428 GATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATCTTGGCCTTCACATT 14508487 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 14508488 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 14508547 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 14508548 GAAGATCTGCAT 14508559 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 14508824 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 14508883 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || || || || ||| || ||| | | | Sbjct 14508884 GATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATTTTGGCCTTTACATT 14508943 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 14508944 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 14509003 Query 35725 AAATATCTGCATTCTG 35740 || ||||||||| || Sbjct 14509004 GAAGATCTGCATTTTG 14509019 >seq7 Length=99894491 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||||||||||| ||||| || | | Sbjct 60057475 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 60057534 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| |||| || ||||| |||| | ||||| || | |||| Sbjct 60057535 AAAGTACGTCCATCTTCCAGTTGCTGGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 60057594 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||| Sbjct 60057595 ATTCCTTCCTTCTCCTGGATCTTGGCCTTTATATTTTCTATCGTATCCGAGGGTTCAACC 60057654 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || | ||| | | |||||||| || |||||| || || Sbjct 60057655 TCAAGGGTGATGGTCTGCCCCATAAGGGTTTTCACGAAAATCTGCGTTTTG 60057705 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608 ||||| |||||||| || | | || || | || ||||||||||| || ||||||||| Sbjct 50186745 TTTTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAATATC 50186804 Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC 35668 | |||||||||| | || | | |||||||| | ||| ||| |||| | || | Sbjct 50186805 AGANGCTGCTGGTCAGGTGGGATACCCTCCTTGT-CTTGAATTTTGGCTTTGAAATTCTC 50186863 Query 35669 A-CCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 | |||| || | || ||||| | ||||| || || ||||| | || |||||||| Sbjct 50186864 AGTGGTGTAACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAA 50186923 Query 35728 TATCTGCAT-TCTG 35740 | |||||| |||| Sbjct 50186924 GAGCTGCATATCTG 50186937 >seq20 Length=124503471 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | |||||||| || | || || || || |||||||| || | Sbjct 36580203 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTTTTTCTGGATGTTGTAGTCTGAG 36580262 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||||||| || || |||||||||| ||||||||||| | || Sbjct 36580263 AGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 36580322 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | |||||| | | ||| ||| || || | | | | | ||||| || | | || Sbjct 36580323 ATACCCTCCTTAT-CTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTTGAC 36580381 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| ||||| ||||| | || |||||||| |||||||| Sbjct 36580382 CTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 36580429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448992966948920