Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq21 253 2e-62 seq5 113 4e-20 seq10 98.7 8e-16 seq3 93.3 3e-14 seq19 86.0 5e-12 >seq21 Length=146407008 Score = 253 bits (280), Expect = 2e-62 Identities = 643/967 (66%), Gaps = 35/967 (4%) Strand=Plus/Minus Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736 |||| | |||||| || | | |||||| | || || || | || ||||| || |||| Sbjct 40657832 TGCTGAGAGAAAACCCCTGGCGCTTTGTCATCTTCCCCATCGAGTACCATGANATCTGGC 40657773 Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAG 43796 | ||||| || || || | || || || ||||| || || || || || || | || | Sbjct 40657772 AGATGTATAAGAAGGCGGANGCTTCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGG 40657713 Query 43797 AC--TTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTT 43854 || || |||| | ||| | | | || ||| | || | | |||||||||| ||| | Sbjct 40657712 ACATTTGGCAC-TGGGAATCCCTGAAGCCCA-AGGAGAGAGATTTTATATCCCATGTTCT 40657655 Query 43855 GGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCA 43914 || || ||||| || || || || ||||| |||||||| ||||| || ||| || Sbjct 40657654 GGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCA 40657595 Query 43915 AGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATAT 43974 ||||||||| | ||||||| || ||||| | ||| || ||||||||||| ||||| || Sbjct 40657594 AGAAGTTCAGATGACAGAAGCCCGCTGTTTCTNTGGCTTCCAAATTGCCATNGAAAACAT 40657535 Query 43975 TCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCA 44034 ||||| |||||||| ||| | || | ||| || ||||| |||||| | || | | | Sbjct 40657534 ACATTCTGAAATGTATAGTTTCCTTACAGACACTTACATAAAAGATCCCAAAGAAAGGGA 40657475 Query 44035 TCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCT 44094 | | ||||| || ||||| | ||| | || | || ||||| |||||| | Sbjct 40657474 ATTTCTCCTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTT 40657415 Query 44095 TAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGT 44151 ||||| | | | | | | | ||| ||||| |||| | ||||| | | Sbjct 40657414 GCNCTGGATTGGGGACAAAGANGCTACCTGTGGTGAACGTGTTGTAGTCTTTGCTGCAGC 40657355 Query 44152 GGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTT 44211 |||||||| ||||||| || | ||||| | ||||| ||| | ||||||||||| | Sbjct 40657354 GGAAGGCA---TCTTTTCTGGTTATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACT 40657298 Query 44212 GATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGA 44271 ||||||||| | || ||||| ||||| | || || | ||||| || ||||| || || Sbjct 40657297 GATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAGATGAGGGTTTACACTGTGA 40657238 Query 44272 TTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTAC 44331 |||||||||| || | | | | || | | || || | | || ||| | | | Sbjct 40657237 TTTTGCTTGCCTGATGTTCAAACACCTGGTACAC--AAACCACTGGAGT-AGAGAGTAAG 40657181 Query 44332 AGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGT 44391 ||| || || | | || || ||||||||| |||| | || || || ||||| Sbjct 40657180 AGAAATAATTATCAATGCTGTTCGGATAGAACAGAAATTCCTCACTGAGGCCTTGCCTGT 40657121 Query 44392 AAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATTGCAGATC 44450 || || || ||||| || || | | ||||| ||||| ||||| | | ||||| Sbjct 40657120 GAAGCCTATTGGGATGAATTGCAC-TCTAATGAAGCAATACATTGAGTTTGTGGCAGACA 40657062 Query 44451 GTTTAC-TTTTGGAACTGGGTTGCGATAAACACTATATT----GTACAAAACCCGTTTGA 44505 | || | |||||||||||| | | || | || ||| | ||||| ||||| Sbjct 40657061 G---ACATGCTGGAACTGGGTT----TTAGCAAGGTTTTCAGAGTAGAGAACCCATTTGA 40657009 Query 44506 TTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGA 44565 |||||||| |||||||| || ||| || ||||| ||||| || | || | || Sbjct 40657008 CTTTATGGAGAATATTTCACTGAAAG-----ACGAACTTCTTTGAGAAGAGAGTAAGGGA 40656954 Query 44566 ATATCAGCGAATGGGCGTCATGATAA---CAAGTGACAATAAATTTACTACGGATGAAGA 44622 |||||| | ||||| || || || ||| || ||| ||||| ||||| || Sbjct 40656953 GTATCAGAGGATGGGAGTGGTGTCAAGTCCAACAGAGAATTCTTTTACCTTGGATGCTGA 40656894 Query 44623 TTTCTAA 44629 |||||| Sbjct 40656893 CTTCTAA 40656887 Score = 192 bits (212), Expect = 5e-44 Identities = 388/568 (68%), Gaps = 12/568 (2%) Strand=Plus/Plus Query 43723 TCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGT 43782 |||||| || ||| ||| ||| || |||| | ||| || || |||| || | ||||| Sbjct 135420092 TCATGATATTTGGAAAACGTATAAGAAAGTAGAGGTTTCTTTCTGGATGGCCCAGGAAGT 135420151 Query 43783 TGATTTGACTAAAGAC--TTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTT 43840 || || | || ||| || |||| ||| || | || || | |||| | ||||| Sbjct 135420152 GGACCTGTCCAAGGACATTTGGCAC--TGGGAAGCCCTGAAGCCTGAGGAAAGATATTTT 135420209 Query 43841 ATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT 43900 ||||| | || |||| || ||||| || | || |||||||| ||||||| ||||| Sbjct 135420210 ATATCCTATATTCTGGCTTTCTTTGCAGCATGTGATGGGATAGTAGATGAAAACTTGGTG 135420269 Query 43901 AGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAAT 43959 | |||| |||||| |||| ||||| |||| | || || ||||| || |||| Sbjct 135420270 GAACAATTTGTTCAAGAAATTCAGATTAC-AGAAACCTTCTGCTTCTATGGCTTCCAAAC 135420328 Query 43960 TGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 ||| |||||||| || ||||| || || | | ||| || || || || |||| ||||| Sbjct 135420329 TGCTATAGAAAACATACATTCTGACATAAATAATCTCCTTATTGACAC--ACATTAAAGA 135420386 Query 44020 TGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAA 44079 | | || | | | | || ||||| || |||||| | |||| | | || | || Sbjct 135420387 TAACAAAGAAAGGGAATTTCTCTTCAATGCCATTGAAACAATGCCTGTG-TCAAGAAGAA 135420445 Query 44080 AGCAGACTGGGCCCTTAAATGGATA---AATTCAAATGATTCTTTTGGAGAACGACTTGT 44136 |||| |||| | | | ||||| || | | | | | ||||||||| ||| Sbjct 135420446 GGCAGTTTGGGTCTTGTATTGGATTGGGAACAAAGACGTTACCCATGGAGAACGTGTTGC 135420505 Query 44137 CGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTT 44196 |||||||| | |||||| ||| | |||||| || || ||||| ||||| ||| | Sbjct 135420506 AGCGTTTGCCCTAGTGGAAAGCACCTGCTTTTCTGGTTCTTTTGCACTGATATTCTGGCT 135420565 Query 44197 AAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 ||||||||||| |||||||||| | || ||||| ||||| | || || ||||||| Sbjct 135420566 CAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGTGATGA 135420625 Query 44257 AGGCTTACATTGCGATTTTGCTTGCTTG 44284 || ||||| || | ||||||||| || Sbjct 135420626 GGGTTTACACTGTTACTTTGCTTGCCTG 135420653 >seq5 Length=126811233 Score = 113 bits (124), Expect = 4e-20 Identities = 92/109 (84%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 43913 CAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971 ||||||||||| |||| ||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct 9675359 CAAGAAGTTCAGATTA-CAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAA 9675417 Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| |||||||| |||||||| || || || ||||| |||||| Sbjct 9675418 CATACATTCTGAAATGTATAGTCTTCTTATTGACACTTACATAAAAGAT 9675466 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 || ||||| | || || ||||| | ||||||||||| |||||||| || || ||||| Sbjct 9677439 GGTGAACGTGTCGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCA 9677498 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| | Sbjct 9677499 TCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTT 9677558 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 9677559 ATCAGCAGAGATGA 9677572 >seq10 Length=67975966 Score = 98.7 bits (108), Expect = 8e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| |||| || || ||| | || ||||| || || || |||| |||| Sbjct 12442809 TGATGGCACTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGGTGAACAGTGAGCTGT 12442750 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || |||| || ||||| || |||||||| ||||| || || || ||||| || | Sbjct 12442749 CCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTAGGTGTGCCTTTCAACATCGCCA 12442690 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | || || ||||||||||| |||||||| ||| Sbjct 12442689 GCTACGCCCTGCTCACGTACATGATTGCGCAC 12442658 >seq3 Length=123372783 Score = 93.3 bits (102), Expect = 3e-14 Identities = 193/285 (68%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 77399 CCGTTCTGCTTCCAGTTCTTAACCCACTTAGTCACACCATTGATGGTGAACATGCTGTCT 77458 || || | |||||| | | ||| || ||||| | |||||| || || ||||| |||||| Sbjct 31258841 CCATTTTCCTTCCAACTTTGAACACAGTTAGTTATACCATTTATAGTAAACATACTGTCT 31258782 Query 77459 GTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGGATGCA 77518 || || | ||||| || |||| || | ||| ||||||| | |||||| | ||| Sbjct 31258781 GTATACAGAACCAGTTTACTGATGTTTTGAGCCTTTGCTTGTTCAATGGCTTTGCAGGCA 31258722 Query 77519 GCCTGGATTTCAGCGCGCTGGTTTGTCTGTTGCCCCACAAGTCGCTCTGCAACATTAAGC 77578 || || ||||| || | |||||||||||| |||| ||||| | ||||| | Sbjct 31258721 GCATGAATTTCTGCTCTTTGGTTTGTCTGTCGCCCAGGAAGTCTAATGCCTACATTTAAA 31258662 Query 77579 GGGTGATTATAACCCCAATATACGCCAATGCCAGCTCG-GGCTTGTTTCTGTCCGTTTGA 77637 || | ||||| || |||| || || ||| | ||| | | | ||| || Sbjct 31258661 GGAAGGCCCGGCCCCCATTAAACGCAGATTCCTGCTTGTGGCCT-TCTACATCCATTACT 31258603 Query 77638 TAAGCAACAGCCGTCAGTGTAGACCACCACGGCGTCACCCATGTA 77682 |||| ||||| ||||||||||| || || ||| |||||||| Sbjct 31258602 GGAGCAGCAGCCATCAGTGTAGACGACAACAAAGTCTCCCATGTA 31258558 >seq19 Length=137426304 Score = 86.0 bits (94), Expect = 5e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 43698 GGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGG 43757 |||||||| | |||||||| ||||| | ||| || ||| ||||||| ||| | ||||||| Sbjct 98072608 GGTTTGTCATCTTTCCAATCCAATACCCTGATATTTGGAAAATGTATAAACAGGCACAGG 98072549 Query 43758 CGTCATTTTGGACAGCAGAAGAAGT 43782 | || || |||||||||||||| || Sbjct 98072548 CTTCCTTCTGGACAGCAGAAGAGGT 98072524 Score = 86.0 bits (94), Expect = 5e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 118922136 AAAATCCTTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 118922195 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| || |||||||| Sbjct 118922196 AACGAGTTTCGGAGTATCAGCG 118922217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395908106241745