Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq20 98.7 8e-16 seq16 89.7 4e-13 seq1 87.8 2e-12 >seq20 Length=124503471 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075 || |||| || |||| ||||| |||| || | || || | ||| || || ||||||| Sbjct 36580198 TAATGCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTTTTTCTGGATGTTGTAGT 36580257 Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135 | | |||| | ||||| |||||||| ||||| | || |||||||| || || | Sbjct 36580258 CTGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAG 36580317 Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195 | || | |||||| ||||| || ||| ||| | | || | ||||| ||| | Sbjct 36580318 GTGGGATACCCTCCTTATCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCT 36580377 Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | ||||||||| || || ||||||||||| ||||| Sbjct 36580378 TGACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 36580429 >seq16 Length=174288623 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075 || |||| || ||| ||||| |||| || | || || ||||| || || ||||||| Sbjct 78464828 TAATGCCACCTNGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTNTGGATGTTGTAGT 78464769 Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135 | | |||| | ||||| |||||||| ||||| | || ||| |||| || || | Sbjct 78464768 CTGAGAGAGTGCGGCCATCTTCCAGCTGTTTNCCGGCAAATATCAGANGCTGCTGGTCAG 78464709 Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195 | || | |||||| || || || ||| ||| | | | || ||||| ||| | Sbjct 78464708 GTGGGATACCCTCCTTGTCTTGAATTTTGACTTTGACGTTCTCAGTGGTGTCACTGGGCT 78464649 Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || | ||||||| | | || ||||||||||| ||||| Sbjct 78464648 CGACCTCAAGGGTGATGGTTTTGCCCATGTGGGTCTTCACAAAGATCTGCAT 78464597 >seq1 Length=215897965 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075 || |||| || ||| ||||| |||| || | || || ||||| || || ||||||| Sbjct 203082191 TAATGCCACCTTGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGT 203082132 Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135 | | |||| | ||||| |||||||||||||| | || ||| ||| || || | Sbjct 203082131 CTGAGAGAGTGCGGCCATCTTCCAGCTGTTTACCGGCAAATATCAGATGCTACTGGTCAG 203082072 Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTG--TTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193 | || | |||||| || | || ||| ||| ||| | || | ||||| ||| Sbjct 203082071 GTGGGATACCCTCCTTGTGTTGAATTTTGGCTTTGTCA--TTCTCAATGGTGTCACTGGG 203082014 Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || || || || | |||||| || || || ||||||||||| ||||| Sbjct 203082013 CTCAACCTCAAGGGTGATGGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 203081960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423279491518488