Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq10 134 1e-26 seq7 114 1e-20 seq5 104 2e-17 seq12 98.7 8e-16 seq15 95.1 1e-14 seq16 93.3 3e-14 >seq10 Length=67975966 Score = 134 bits (148), Expect = 1e-26 Identities = 128/164 (78%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||||||||| || | ||||||||||||||| || || Sbjct 12442647 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 12442706 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || |||||||| ||||| |||||||| ||||| || || ||||| | || | Sbjct 12442707 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 12442766 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 || || ||||| || | ||| ||||| ||||| || ||||| || Sbjct 12442767 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAG 12442810 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| ||||| || ||||||||||||||||| || || || || |||| ||| Sbjct 12446837 CATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTC 12446896 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 || ||||| ||| ||| ||| ||||||||||||||| ||| || ||||| || Sbjct 12446897 CCCTTCTTCTCTGGTGGAGAACCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATC 12446956 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||||| || || ||||| ||| |||||||| | |||||||| || Sbjct 12446957 CCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGGATCC 12447004 >seq7 Length=99894491 Score = 114 bits (126), Expect = 1e-20 Identities = 186/261 (71%), Gaps = 9/261 (3%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 32679817 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 32679758 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| || || ||||||||||||||||| ||| ||| ||||||| || Sbjct 32679757 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACTCATAATCACCAGATT 32679698 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 32679697 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 32679639 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 110615 || || || |||| ||||| || || || || |||||||||||| ||| ||||| Sbjct 32679638 TGAG---CGGCGGCAGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTAGGACA 32679582 Query 110616 CGCGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 32679581 --CAGCGACGATGCAGTTTAG 32679563 >seq5 Length=126811233 Score = 104 bits (114), Expect = 2e-17 Identities = 182/260 (70%), Gaps = 10/260 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || | |||||||| |||| || || || | | Sbjct 62494277 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTATCTGCTGAGAACTAAATTAATTCTACCCTT 62494218 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| || | ||||||||||||||||| ||||||| ||||||| || Sbjct 62494217 TAAAGGTCGATTCTTCTCAGAAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 62494158 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGA-AAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 62494157 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTAGAAATATCTGAATTCATTCC 62494099 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 110616 || || |||| ||||| || | ||| || |||||||||||| ||||| || Sbjct 62494098 TGAG------CGGCGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGG-GAC 62494046 Query 110617 GCGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 62494045 ACAGCGACGATGCAGTTTAG 62494026 >seq12 Length=181502896 Score = 98.7 bits (108), Expect = 8e-16 Identities = 178/259 (69%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || | |||||||| |||| || || || | | Sbjct 13887826 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTNTCTGCTGAGAACTAAATTAATTCTANCCTT 13887885 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| || || ||||||||||| |||| |||||||| ||||||| || Sbjct 13887886 NAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTACCTACCCATAATCACCAGATT 13887945 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| | | |||| | ||| | || | | || || || | Sbjct 13887946 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATTCC 13888004 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACG 110617 || ||| |||| ||||| || || || || || |||||||||| | | || Sbjct 13888005 TGAG------CGGAGGCCAGGGCAGGTCCCCATTCTTGCCAATGCCCATGTTTTGGGACA 13888058 Query 110618 CGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 13888059 CAGCGACGATGCAGTTTAG 13888077 >seq15 Length=160576332 Score = 95.1 bits (104), Expect = 1e-14 Identities = 181/262 (69%), Gaps = 12/262 (5%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCC--CTGCTGAGGACTACGTTTATCCTGTCT 110436 ||||||||| || || || || || || |||||||| |||| || || || | Sbjct 22446911 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTTTCTGCTGAGAACTAAATTAATTCTACCC 22446852 Query 110437 CTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACG 110496 | | | ||| |||||| || || ||||||||||||||||| ||| | | ||||||| Sbjct 22446851 TTTAAANGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACNCNTAATCACCAGA 22446792 Query 110497 TTCTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTT 110555 ||||| || ||| |||||||| || | |||| | ||| | || | | | || || || Sbjct 22446791 TTCTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT 22446733 Query 110556 GCAAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGAC 110614 | || || |||| ||||| || || || || |||||||||||| ||||| Sbjct 22446732 CCTGAG------CGGCGGCCAGGGCAGGTCCCCNTTCTTGCCGATGCCCATGTTCTGG-G 22446680 Query 110615 ACGCGGCCACGATACCGTTCAG 110636 || | || ||||| | ||| || Sbjct 22446679 ACACAGCGACGATGCAGTTTAG 22446658 >seq16 Length=174288623 Score = 93.3 bits (102), Expect = 3e-14 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 10775552 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 10775611 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | |||| ||||| || || ||||||||||||||||| ||| ||| ||||||| || Sbjct 10775612 TAAAGGTNGNTTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACNCATAATCACCAGATT 10775671 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 ||| || ||| |||||||| || | ||||| Sbjct 10775672 CTGTTTACCTTCTACTGAAGAGGTTGTGGTCA 10775703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404728022750508