Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq20 118 7e-22 seq1 114 8e-21 seq16 113 3e-20 seq3 82.4 5e-11 >seq20 Length=124503471 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| || |||||||||| || || ||| || || || ||||| || ||||| Sbjct 36580202 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTTTTTCTGGATGTTGTAGTCTGA 36580261 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || ||||| ||||||||||| | |||||| ||||| || || Sbjct 36580262 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 36580321 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||| ||| ||| ||| | ||| || | ||| ||||| | || | Sbjct 36580322 GATACCCTCCTTATCT-TGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTTGA 36580380 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || | ||| || ||||| || || | || |||||||| ||||||||||| Sbjct 36580381 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 36580432 >seq1 Length=215897965 Score = 114 bits (126), Expect = 8e-21 Identities = 160/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||||||||| || || ||| ||| || || ||||| || ||||| || || || Sbjct 203082177 AGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGG 203082118 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || ||||||||||||||||| | | ||| ||||| || || | |||||| Sbjct 203082117 CCATCTTCCAGCTGTTTACCGGCAAATATCAGATGCTACTGGTCAGGTGGGATACCCTCC 203082058 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||| | ||| ||| | ||| | | ||| ||||| | ||| || || | ||| Sbjct 203082057 TTGTGT-TGAATTTTGGCTTTGTCATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGT 203081999 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || ||||| || || | || |||||||| ||||||||||| Sbjct 203081998 GATGGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCATGTT 203081957 >seq16 Length=174288623 Score = 113 bits (124), Expect = 3e-20 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||| || |||||||||| || || ||| ||| || || ||||| || ||||| Sbjct 78464824 GCCACCTNGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTNTGGATGTTGTAGTCTGA 78464765 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || ||||| ||||||||||| | | |||| ||||| || || Sbjct 78464764 GAGAGTGCGGCCATCTTCCAGCTGTTTNCCGGCAAATATCAGANGCTGCTGGTCAGGTGG 78464705 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| ||| ||| | | | ||||| | ||| | Sbjct 78464704 GATACCCTCCTTGTCT-TGAATTTTGACTTTGACGTTCTCAGTGGTGTCACTGGGCTCGA 78464646 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || | ||| || ||||| || | || |||||||| ||||||||||| Sbjct 78464645 CCTCAAGGGTGATGGTTTTGCCCATGTGGGTCTTCACAAAGATCTGCATGTT 78464594 >seq3 Length=123372783 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| ||||||| ||||| || || ||| ||| | || ||||| || ||||| Sbjct 107248229 GCCACCTCACAGACGCAGCACCAGGTGCAGGGTGGACTCTTCCTGGATGTTCTAGTCTGA 107248288 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || | | | || || || ||||| || |||||||| | || ||| ||||| ||| | Sbjct 107248289 GAGACTGCAGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGACACTGCTGGTCAGGCAG 107248348 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| || | ||| || | | | ||||| | ||||| Sbjct 107248349 GATGCCCTCCTTGTCTTGGAT-TTCGGCTTTGACATTCTCAGTGGTGTCAGTGGCCTCCA 107248407 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| | || || || | | || |||||||| |||||||| Sbjct 107248408 CCTCAAGGGTGACGGTCTTGCCCATGAGGGTGTTCACAAAGATCTGCAT 107248456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313503884490917