Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq20 104 2e-17 >seq20 Length=124503471 Score = 104 bits (114), Expect = 2e-17 Identities = 166/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| |||| | ||| ||||||| || || ||| || ||| || || || || || | Sbjct 36580202 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTTTTTCTGGATGTTGTAGTCTGA 36580261 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGG 39175 || || || | || || ||||||||||| |||||||| |||||||||||||| ||||| Sbjct 36580262 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 36580321 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | | | ||| || || ||||| ||||| || | | || || || | || | Sbjct 36580322 G-ATACCCTCCTTATCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTTGA 36580380 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTACG 39291 | || | ||||| |||| ||||| || || || |||||||| ||||| ||| || Sbjct 36580381 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTTTGCG 36580436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427872733184237