Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq10 145 6e-30 seq7 105 5e-18 seq5 100 2e-16 seq12 95.1 1e-14 seq15 91.5 1e-13 seq16 84.2 2e-11 >seq10 Length=67975966 Score = 145 bits (160), Expect = 6e-30 Identities = 131/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||||||||| || | ||||||||||||||| || ||| Sbjct 12442647 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 12442706 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || |||||||| || || |||||||| |||||||| || ||||| | || | Sbjct 12442707 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 12442766 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 || || ||||| || | ||||||||| ||||| || ||||| ||| Sbjct 12442767 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAGA 12442811 Score = 105 bits (116), Expect = 5e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 ||||||||||||||||| || || || || |||| ||| || ||||| ||| ||| Sbjct 12446859 AAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTCCCCTTCTTCTCTGGTGGAGAAC 12446918 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||||||||||||||| ||| || ||||| |||||||| || || ||||| Sbjct 12446919 CCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATCCCAGATTTTCACTCCCTTGGAA 12446978 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || |||||||| | |||||||| || Sbjct 12446979 GACAGCTCTTTAGCATTTGTGGATCC 12447004 >seq7 Length=99894491 Score = 105 bits (116), Expect = 5e-18 Identities = 184/261 (70%), Gaps = 9/261 (3%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 32679817 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 32679758 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| || || ||||||||||||||||| ||| ||| ||||||| || Sbjct 32679757 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACTCATAATCACCAGATT 32679698 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| || | |||| | ||| | || | | | || || || | Sbjct 32679697 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 32679639 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 114498 || | ||| |||| ||||| || || || || |||||||||||| ||| ||||| Sbjct 32679638 TGAG---CGGCGGCAGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTAGGACA 32679582 Query 114499 CGCTGCCACGATACCGTTCAG 114519 | || ||||| | ||| || Sbjct 32679581 --CAGCGACGATGCAGTTTAG 32679563 >seq5 Length=126811233 Score = 100 bits (110), Expect = 2e-16 Identities = 181/260 (70%), Gaps = 10/260 (4%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || | |||||||| |||| || | || | | Sbjct 62494277 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTATCTGCTGAGAACTAAATTAATTCTACCCTT 62494218 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| || | ||||||||||||||||| ||||||| ||||||| || Sbjct 62494217 TAAAGGTCGATTCTTCTCAGAAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 62494158 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTCGA-AAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| || | |||| | ||| | || | | | || || || Sbjct 62494157 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTAGAAATATCTGAATTCATT-- 62494101 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 114499 || | ||| |||| ||||| || | ||| || |||||||||||| ||||| || Sbjct 62494100 ----CCTGAGCGGCGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGG-GAC 62494046 Query 114500 GCTGCCACGATACCGTTCAG 114519 | || ||||| | ||| || Sbjct 62494045 ACAGCGACGATGCAGTTTAG 62494026 >seq12 Length=181502896 Score = 95.1 bits (104), Expect = 1e-14 Identities = 177/259 (68%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || | |||||||| |||| || | || | | Sbjct 13887826 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTNTCTGCTGAGAACTAAATTAATTCTANCCTT 13887885 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| || || ||||||||||| |||| |||||||| ||||||| || Sbjct 13887886 NAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTACCTACCCATAATCACCAGATT 13887945 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| | | |||| | ||| | || | | || || || Sbjct 13887946 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATT-- 13888002 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACG 114500 || | |||| |||| ||||| || || || || || |||||||||| | | || Sbjct 13888003 ----CCTGAGCGGAGGCCAGGGCAGGTCCCCATTCTTGCCAATGCCCATGTTTTGGGACA 13888058 Query 114501 CTGCCACGATACCGTTCAG 114519 | || ||||| | ||| || Sbjct 13888059 CAGCGACGATGCAGTTTAG 13888077 >seq15 Length=160576332 Score = 91.5 bits (100), Expect = 1e-13 Identities = 180/262 (69%), Gaps = 12/262 (5%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCC--CTGCTGAGGACTACGTTTAGCCTGTCT 114319 ||||||||| || || || || || || |||||||| |||| || | || | Sbjct 22446911 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTTTCTGCTGAGAACTAAATTAATTCTACCC 22446852 Query 114320 CTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACG 114379 | | | ||| |||||| || || ||||||||||||||||| ||| | | ||||||| Sbjct 22446851 TTTAAANGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACNCNTAATCACCAGA 22446792 Query 114380 TTCTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTT 114438 ||||| |||||| | ||||| || | |||| | ||| | || | | | || || || Sbjct 22446791 TTCTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT 22446733 Query 114439 GCAAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGAC 114497 || | ||| |||| ||||| || || || || |||||||||||| ||||| Sbjct 22446732 ------CCTGAGCGGCGGCCAGGGCAGGTCCCCNTTCTTGCCGATGCCCATGTTCTGG-G 22446680 Query 114498 ACGCTGCCACGATACCGTTCAG 114519 || | || ||||| | ||| || Sbjct 22446679 ACACAGCGACGATGCAGTTTAG 22446658 >seq16 Length=174288623 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 10775552 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 10775611 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | |||| ||||| || || ||||||||||||||||| ||| ||| ||||||| || Sbjct 10775612 TAAAGGTNGNTTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACNCATAATCACCAGATT 10775671 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCA 114413 ||| |||||| | ||||| || | ||||| Sbjct 10775672 CTGTTTACCTTCTACTGAAGAGGTTGTGGTCA 10775703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404581396021414