Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq21 259 4e-64 seq15 104 2e-17 seq5 91.5 1e-13 seq19 89.7 4e-13 seq12 86.0 5e-12 >seq21 Length=146407008 Score = 259 bits (286), Expect = 4e-64 Identities = 521/761 (68%), Gaps = 19/761 (2%) Strand=Plus/Plus Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCT 4438 || ||| || ||||| || || || || |||| || ||| || || ||||| | Sbjct 40657060 TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATAGGCTT 40657119 Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498 |||||| | || | || | || | |||||||| || || | | ||||| || Sbjct 40657120 CACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAGCATTGATAATTATTTC 40657179 Query 4499 TTTTATTTTAT-CTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAAT 4557 | ||| | | | || || |||||| | ||| | || | |||| | || ||||||| Sbjct 40657180 TCTTACTCTCTACTCCAG-TGGTTTGTGTACCAGGTGTTTGAACATCAGGCAAGCAAAAT 40657238 Query 4558 CACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTA 4617 |||| || ||||| || ||||||||||| ||||| || ||||| || | || ||||| | Sbjct 40657239 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCA 40657298 Query 4618 AACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTA 4677 |||| || || ||||| ||||| | ||||| | |||||||||| ||||||| Sbjct 40657299 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCG 40657355 Query 4678 CGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTT 4736 | || ||||| |||| | || || | | ||| ||||||| |||||| Sbjct 40657356 CTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNT-CTTTGTCCCCAATCCAGNGC 40657414 Query 4737 AATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA--ATAATT 4794 || ||||| | || || ||||| || || || || || | || || || | | || | Sbjct 40657415 AAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAGGAGAAAT 40657474 Query 4795 TACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853 | | ||| | |||| |||| || ||||||||| | || | ||||||||||||||| Sbjct 40657475 TCCCTTTCTT---TGGGATCTTTTATGTAAGTGTCTGTAAGGAAACTATACATTTCAGAA 40657531 Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913 ||||| ||||| || ||||| || || || | || || | |||||||| | |||||| Sbjct 40657532 TGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCTGTCATCTGAACT 40657591 Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 || | | ||||| || || |||||||| |||||||| || ||||| |||||||| || Sbjct 40657592 TCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAA 40657651 Query 4974 GCCAAAACATGAGATATAAAGTACTGT-TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAA 5032 ||| |||||| |||||||| | || | || | ||||| || || ||||| | ||| Sbjct 40657652 ACCAGAACATGGGATATAAAAT-CTCTCTCCTTGGGCTTCAGGGATTCCCAGT--GCCAA 40657708 Query 5033 A--TCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTAC 5090 | || || | | || || || || | ||||| || || || ||||| || || ||| Sbjct 40657709 ATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCNTCCGCCTTCTTATAC 40657768 Query 5091 ATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 || ||| || ||| | |||| || || | |||||||| Sbjct 40657769 ATCTGCCAGATNTCATGGTACTCGATGGGGAAGATGACAAA 40657809 Score = 176 bits (194), Expect = 4e-39 Identities = 383/567 (68%), Gaps = 15/567 (3%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| | ||| || ||||| || || |||||||| ||||| || ||||| || | Sbjct 135420649 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 135420590 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||| | |||| || || ||||| ||||| ||||| || ||||||||| | Sbjct 135420589 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGCAG 135420530 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA 4727 ||| ||| || |||||||||| | | || || | | |||||| | Sbjct 135420529 GTGCTTTCCACTAGGGCAAACGCTGCAACACGTTCTCCATGGGTAACGTCTTTGTTCCCA 135420470 Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787 ||||| | || |||| || || ||||| || || || ||||| | || || || Sbjct 135420469 ATCCAATACAAGACCCAAACTGCCTTCTTCTTGACACA-GGCATTGTTTCAATGGCATTG 135420411 Query 4788 AATA---ATTTACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 || | ||| |||| || || |||| ||| | ||||| || || || ||| Sbjct 135420410 AAGAGAAATTCCCTTTCTT----TGTTATCTTTAATGT--GTGTCAATAAGGAGATTATT 135420357 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 || ||||||||||| |||||||||||| | || || || || ||||| | |||||| Sbjct 135420356 TATGTCAGAATGTATGTTTTCTATAGCAGTTTGGAAGCCATAGAAGCAGAAGGTTTCTGT 135420297 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 | |||| ||| | | |||| ||| || |||||||| | |||||| || |||| || Sbjct 135420296 AATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGC 135420237 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 |||||| || |||| || || |||||||| || ||| |||||||| || || ||| Sbjct 135420236 TGCAAAGAAAGCCAGAATATAGGATATAAAATATCTTTCCTCAGGCTTCAGGGCTTCCCA 135420177 Query 5024 GTGGGGCAAA--TCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCT 5081 || | |||| || || | | || ||||| | | |||| || || | || || Sbjct 135420176 GT--GCCAAATGTCCTTGGACAGGTCCACTTCCTGGGCCATCCAGAAAGAAACCTCTACT 135420119 Query 5082 TTTTTGTACATAGACCAAATATCAGGA 5108 || || ||| | |||||||||| || Sbjct 135420118 TTCTTATACGTTTTCCAAATATCATGA 135420092 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 31775 AAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCT 31834 ||||| | ||||| || || | ||||| || || || ||| || | |||| | ||| Sbjct 140850354 AAAACGAACATTCAGATAGCTCTTCCTTCTGGATGTTAGGGAGGAGTGGCTCT--GGTCT 140850411 Query 31835 GGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGA 31894 || ||||| | ||||||||||| || | || || ||||| |||||| ||| |||| | Sbjct 140850412 GGCTTGGCTGCAAAACACTTTATAGATATAGGAGCTGGTGTCATAGATGAAGATTATACA 140850471 Query 31895 GGAAACGTTGGAATTGTGTTGTTTAATTTTGG 31926 ||||| ||||| ||| || |||||||||| Sbjct 140850472 GGAAATGTTGGCGCTGTCCTGCTTAATTTTGG 140850503 >seq15 Length=160576332 Score = 104 bits (114), Expect = 2e-17 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 31775 AAAACCGATATTCAAATTTCTTTACCTTCA--GGGTGCTACGGACGAATAGCTCCTAGAT 31832 ||||| || ||||| || || | ||||| ||||| || ||| || ||| ||| | | Sbjct 77992230 AAAACAGACATTCAGATAGCTCTTCCTTCTCTGGGTGTTATGGAAGAGTAGTTCCATGGT 77992171 Query 31833 CTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATA 31892 |||| ||||| | ||||||||||| || || || || ||||| ||||| | | |||| Sbjct 77992170 CTGGCTTGGCTGCAAAACACTTTATTGATGTAGGAGCTGGTGTCATAGACGAAAATTATA 77992111 Query 31893 GAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG 31926 ||||||| ||||| |||| ||||||||||||| Sbjct 77992110 GAGGAAATGTTGGTGTTGTACTGTTTAATTTTGG 77992077 >seq5 Length=126811233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 || |||| || |||||||| || || || |||||||||||||||||||| ||||| || Sbjct 9675468 GGATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATG 9675409 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926 ||||| || || || || || || | |||||||| | |||||||| | | ||||| Sbjct 9675408 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATC 9675351 >seq19 Length=137426304 Score = 89.7 bits (98), Expect = 4e-13 Identities = 98/130 (75%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || || ||||| ||||| || || ||||||||||||||||| || || | Sbjct 98066187 AAAATCTT---ACCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 98066243 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 ||||| || ||||||| || || | ||||| || |||||||| || | ||| || | Sbjct 98066244 TGTGAGAGATGAAGTACTTCTCATCTGCTTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 98066303 Query 5041 TTAAATCAAC 5050 ||| || || Sbjct 98066304 ATAAGTCGAC 98066313 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || || || || ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 118922214 TGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 118922155 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 118922154 ATAAAATCAAAAGGATT 118922138 >seq12 Length=181502896 Score = 86.0 bits (94), Expect = 5e-12 Identities = 166/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 31771 AGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAG 31830 ||| |||| || ||||| || || | ||||| |||| || || || ||||||| | Sbjct 43245731 AGTGAAAATGGACATTCAGATAGCTCTTCCTTCTGGGTTTTATAGAAGAGTAGCTCCATG 43245790 Query 31831 ATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTA 31890 ||||| ||||| | |||||||||||| | || || | | ||| ||||| ||| || Sbjct 43245791 GTCTGGCTTGGCTGCAAAACACTTTATCAATGTAGGAACTGATGTCATAGACAAAGATTA 43245850 Query 31891 TAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAA 31947 ||||||| ||||| || ||||||||||||| |||||| | || ||| || Sbjct 43245851 CTGAGGAAATGTTGGTGGTGAACTGTTTAATTTTGGCAAAGAAAAGT-TTAAAGTCAGAA 43245909 Query 31948 AAAGGGCGATAGGGTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGT 32007 ||| | ||| | | || || || ||||| ||| ||| | || ||||||||| Sbjct 43245910 AAA--GTGATCGCATTGCACAGCTCATTTGTGAATGAATTTTTAATCCAGAAATAGAAGA 43245967 Query 32008 AG 32009 || Sbjct 43245968 AG 43245969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425386453864817