Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq21 376 3e-99 seq5 111 2e-19 seq6 105 9e-18 seq19 84.2 3e-11 >seq21 Length=146407008 Score = 376 bits (416), Expect = 3e-99 Identities = 648/939 (69%), Gaps = 17/939 (2%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| |||||| |||| || | |||| ||| ||| | || |||| ||||| Sbjct 40656881 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACACCACTCC 40656940 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| | ||||| || | || | ||||| || || || || ||| || ||| || Sbjct 40656941 CATCCTCTGATACTCCCTTACTCTCTTCTCAAAGAAGTTCGT-----CTTTCAGTGAAAT 40656995 Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965 ||| |||||||| |||||||| || || | | ||| || |||| || | ||| Sbjct 40656996 ATTCTCCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAG 40657055 Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025 || |||| ||||| || || || || ||| ||||| | |||||||| || || Sbjct 40657056 CAT--GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAAT 40657113 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085 | | || || || | ||||| || || || | ||||| || ||||||| | || Sbjct 40657114 AGGCTTCACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAGCATTGATAAT 40657173 Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145 ||| | |||| | | ||| |||| | | || ||||| ||||| | || || Sbjct 40657174 TATTTCTCTTACTCTCTACTCCAGTGGTTTGTGTACCAGGTGTTTGAACATCAGGCAAGC 40657233 Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205 ||||||||| || | ||| |||||||| ||||| | ||| || ||||||||||| || || Sbjct 40657234 AAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGG 40657293 Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265 ||| ||||| ||||| |||||||| ||||| | || ||| | |||||||||| |||| Sbjct 40657294 CATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCC 40657350 Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCA 48322 ||| | || ||||| | || | || || | | || || |||| ||||| Sbjct 40657351 TTCCGCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGTCCCCAATCCA 40657410 Query 48323 CCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382 | |||||||| ||||||||||| ||||||||||| ||||| || ||||| | ||| Sbjct 40657411 GNGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAGGAG 40657470 Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442 ||| | |||| ||| |||||| | |||||| ||| | | | |||||||||||| || Sbjct 40657471 AAATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCTGTAAGGAAACTATACATTTCAGA 40657530 Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502 || || ||||| || || || || || || | ||||| | |||||||| ||||| || Sbjct 40657531 ATGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCTGTCATCTGAAC 40657590 Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562 || | |||||| || |||| || ||||||||||| |||||||| || ||||| || Sbjct 40657591 TTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAA 40657650 Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGAT 48622 | | ||||| ||||||| | | || |||| |||| | ||||| || Sbjct 40657651 AACCAGAACATGGGATATAAAATCTCTCTCCTTGGGCTTCAGGGATTCCCAGTGCCAAAT 40657710 Query 48623 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACAT 48682 || || || | || || || || || ||||| || || || || || || |||||||| Sbjct 40657711 GTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCNTCCGCCTTCTTATACAT 40657770 Query 48683 ATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | ||| || ||| ||| | ||| ||||| || ||||| Sbjct 40657771 CTGCCAGATNTCATGGTACTCGATGGGGAAGATGACAAA 40657809 Score = 224 bits (248), Expect = 1e-53 Identities = 390/561 (70%), Gaps = 12/561 (2%) Strand=Plus/Minus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || ||||| | ||| || | ||| ||||| || ||||| | ||| || ||||||||||| Sbjct 135420649 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 135420590 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || ||||| ||||| ||||| |||||||| ||||| || ||||| ||||||||| | Sbjct 135420589 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGCAG 135420530 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTG 48316 ||| ||| || ||||| || | || | ||||| ||||| | ||| ||| Sbjct 135420529 GTGCTTTCCACTAGGGCAAACGCTGCAACACGTTCTCCATGGGTAAC-GTCTTTGTTCCC 135420471 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376 ||||| ||||| | ||||||||||| |||| |||||||||||| || ||||| Sbjct 135420470 AATCCAATACAAGACCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTTCAATGGCATT 135420412 Query 48377 AAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACAT 48436 |||||||| | |||| ||| ||||||||| || || || || | ||| ||| || Sbjct 135420411 GAAGAGAAATTCCCTTTCTTTGTTATCTTTAATGT--GTGTCAATAAGGAGATTATTTAT 135420354 Query 48437 TTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGAT 48496 || || || || ||||| || || | || || || || || || | |||||| || Sbjct 135420353 GTCAGAATGTATGTTTTCTATAGCAGTTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAAT 135420294 Query 48497 CTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGC 48556 ||| | || | |||| |||| |||| || |||| |||||| ||||||| || || Sbjct 135420293 CTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGC 135420234 Query 48557 AAAAAATGC--TAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAG 48614 ||| || || |||| | | | ||||||||| |||| | | |||| | |||| Sbjct 135420233 AAAGAAAGCCAGAATATAGGAT--ATAAAATATCTTTCCTCAGGCTTCAGGGCTTCCCAG 135420176 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 | || || || || | || ||||| | || |||| || || ||||| |||| Sbjct 135420175 TGCCAAATGTCCTTGGACAGGTCCACTTCCTGGGCCATCCAGAAAGAAACCTCTACTTTC 135420116 Query 48675 TTATACATATTCCATATATCA 48695 |||||| | ||||| |||||| Sbjct 135420115 TTATACGTTTTCCAAATATCA 135420095 >seq5 Length=126811233 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| || || | ||| || ||||||||||| || ||||| ||||| ||||| ||| Sbjct 9677572 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9677513 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||| | || ||||| || |||||||| |||||||| || || ||||| || Sbjct 9677512 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGC 9677454 Score = 86.0 bits (94), Expect = 9e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 48391 tttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450 |||| ||| |||||| | |||||| || || | ||||||||||||||| || || || | Sbjct 9675476 TTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGT 9675417 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505 |||| || || || || || || || ||||| | |||||||| ||||| || || Sbjct 9675416 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 9675362 >seq6 Length=126788305 Score = 105 bits (116), Expect = 9e-18 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | || Sbjct 66007904 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATGGAC 66007963 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || |||| || |||||||| ||||| || ||||| || || | | |||||| Sbjct 66007964 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 66008023 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 66008024 TTTCTTATACCAT 66008036 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| | |||||||| ||||| Sbjct 66025963 GTACCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAACCACCTCTCAGAAAGAAGATTA 66026022 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 ||||||||||| |||| || ||||| || || || || || | ||| | ||||||| Sbjct 66026023 TATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATCCCAACAGATACTCTCATCAAC 66026082 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 ||||| || ||||||||| || Sbjct 66026083 ATATGTTGTGGTCTTTCAGCC 66026103 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||| ||||| ||||||||||| ||||| ||||||| || ||||||| || | || Sbjct 66016448 ACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 66016507 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| || || || | || || ||||||| || Sbjct 66016508 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 66016567 Query 78123 TC 78124 || Sbjct 66016568 TC 66016569 >seq19 Length=137426304 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 ||| ||||| |||||||| || || |||| ||| | ||||||||| ||||| |||||| Sbjct 98072523 TACCTCTTCTGCTGTCCAGAAGGAAGCCTGTGCCTGTTTATACATTTTCCAAATATCAGG 98072582 Query 48698 GTATTGGATTGGGAAAATAACAAA 48721 |||||||||||| || || ||||| Sbjct 98072583 GTATTGGATTGGAAAGATGACAAA 98072606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691894040995360