Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq13 159 8e-34 seq21 143 6e-29 seq16 141 2e-28 seq8 138 3e-27 seq7 131 4e-25 seq2 114 3e-20 seq14 104 6e-17 >seq13 Length=81577475 Score = 159 bits (176), Expect = 8e-34 Identities = 170/224 (76%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || ||||| || || |||||||||||||| ||| Sbjct 45553443 AAAATGC---AGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAA 45553387 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || || || || || || || ||||| ||||| || |||||||| ||||| Sbjct 45553386 CCCTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCT 45553327 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||| |||| ||||| || || || || || ||||||||| | ||| | | || Sbjct 45553326 GATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGAC 45553267 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | ||||| || || || || |||||||| |||||||| Sbjct 45553266 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 45553223 >seq21 Length=146407008 Score = 143 bits (158), Expect = 6e-29 Identities = 166/224 (74%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | ||||||||||||||||| | || || || |||||||||||||| ||| Sbjct 111222533 AAAATGC---AGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACCCTCGAGGTTGAA 111222589 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || | || || || || || ||||| ||||| || |||||||| ||||| Sbjct 111222590 CCCTCGGATATGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCT 111222649 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||| |||| ||||| || || || || || ||||||||| | ||| | | || Sbjct 111222650 GATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGAC 111222709 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | || || || || || || ||||||| |||||||| Sbjct 111222710 TACAATATTCANAAGGAGTCTACTCTTCATCTTGNGTTGAGACT 111222753 >seq16 Length=174288623 Score = 141 bits (156), Expect = 2e-28 Identities = 159/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || ||||| |||||||| ||||| || || ||| Sbjct 78464600 CAGATCTTTGTGAAGACCCACATGGGCAAAACCATCACCCTTGAGGTCGA--GCCCAGTG 78464657 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||| |||||||||||| || ||||| ||||| || || ||||| || ||||||| Sbjct 78464658 ACACCACTGAGAACGTCAAAGTCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGC 78464717 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || || || ||||| |||||||| |||||||| | ||||| | || || ||| Sbjct 78464718 AGCNTCTGATATTTGCCGGNAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTACAACA 78464777 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 |||| ||||| || || ||||| || || ||| Sbjct 78464778 TCCANAAAGAGTCCACCCTGCACCTGGTGTTG 78464809 >seq8 Length=70300957 Score = 138 bits (152), Expect = 3e-27 Identities = 173/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| | || |||||||| || || || || || || |||||||| |||| Sbjct 14509023 AGGTCAAAATGC---AGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGG 14508967 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| |||||||||| || || || || || || || |||||||| || Sbjct 14508966 TGGA--GCCCAGTGACACCATCGAAAATGTAAAGGCCAAAATCCAAGATAAAGAAGGCAT 14508909 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 ||| || |||||||| | || ||||| || || || ||||| |||||||| | ||||| Sbjct 14508908 CCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 14508849 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | | || || ||| |||| || || || || ||||| || || || | || ||| Sbjct 14508848 TTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGA 14508794 Score = 136 bits (150), Expect = 9e-27 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 14508556 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 14508499 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || ||||| || || |||||||| ||||| || ||||||| Sbjct 14508498 ACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCCCCCGACCAGC 14508439 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | || || ||| Sbjct 14508438 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACA 14508379 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 14508378 TCCAGAAGGAGTCGACCCTGCACCTGGT 14508351 Score = 127 bits (140), Expect = 5e-24 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 14508784 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 14508727 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || || || ||||| || ||||| || || || ||||||| Sbjct 14508726 ACACCATCGAAAATGTRAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCCGACCAGC 14508667 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | || || ||| Sbjct 14508666 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACA 14508607 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || || | || ||| Sbjct 14508606 TCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGA 14508566 >seq7 Length=99894491 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || | || | || |||||||| ||||| ||| ||| || Sbjct 60057698 CAGATTTTCGTGAAAACCCTTATGGGGCAGACCATCACCCTTGAGGTTGAACCCTCGGAT 60057639 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || | || ||||| ||||| || |||||||| ||||| || |||||| Sbjct 60057638 ACGATAGAAAATATAAAGGCCAAGATCCAGGAGAAGGAAGGAATTCCTCCTGATCAGCAA 60057579 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || | || || ||||||||| | ||| | | || || || | Sbjct 60057578 AGACTGATCTTTGCTGGCCAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAATATT 60057519 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 60057518 CAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 60057484 >seq2 Length=86128551 Score = 114 bits (126), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 11/215 (5%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || ||||| || || |||||||| ||||| ||| || | Sbjct 25050083 CAGATTTTCGTGAAAACCCTTACAGGTAAGACCATCACCCTTGAGGTTGAACCCTTGAAT 25050024 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || || || || ||||| || |||||||| ||||| || |||||| Sbjct 25050023 ACAACAGAAAATGTAAAGGCCAATATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 25049964 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || | ||||||| ||| || || ||| | Sbjct 25049963 AGACTGATCTTTGCTGGCAAGCAATTGGAAGATG-------TCT----GACTACAACATT 25049915 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 25049914 CAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 25049880 >seq14 Length=179790006 Score = 104 bits (114), Expect = 6e-17 Identities = 155/216 (72%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCT-CAGA 177982 || |||||| | ||| | || || || || || ||||||||||||| ||| || || Sbjct 178100439 CAGATTTTCATAAAATC-CTTACGGGGAAGACCGTCACCCTCGAGGT-CAAACCTGTGGA 178100496 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 || || || || || || ||||| ||||| || ||||||| ||||| || |||| Sbjct 178100497 TACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGNAAGGAATTCCTCCTGATNAGCA 178100556 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 |||| ||||| || || || || || ||||||||| | ||| | | || || ||| | Sbjct 178100557 NAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTGT--CTGACTACAACAT 178100614 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || | || || |||||||| |||||||| Sbjct 178100615 TCAAAAGGAGCCCACTCTTCATCTTGTGTTGAGACT 178100650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1198802857765506