Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1724 255 6e-63 seq1685 237 2e-57 seq1399 102 8e-17 >seq1724 Length=455154 Score = 255 bits (282), Expect = 6e-63 Identities = 436/629 (69%), Gaps = 5/629 (1%) Strand=Plus/Plus Query 16919 ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAA 16978 |||| ||||| || ||| | || || | ||| ||||||| || || ||||| || Sbjct 265662 ACTCTCTCCTCCGATGGTTTGTGCACCAGGTATTTGAACATCAAGCA-GCAAAATCACAG 265720 Query 16979 TGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCT 17038 ||||| ||||| |||||||| |||||||| || ||||| || | || |||||| |||| Sbjct 265721 TGTAAACCCTCATCTCTGCTAATAAGTTCATTCGAAAACGTGAGGCCAGGCATCAGTCCT 265780 Query 17039 CGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGAT 17098 |||||||| | ||| ||||||| || || || || |||||||| || || || || | Sbjct 265781 CGTTTCTTGAGCCACAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCTACTGCA 265840 Query 17099 GCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACC 17158 ||||| || | | ||||| | || | || ||||||| | |||||| | | Sbjct 265841 GCAAAGGCTACAACACGTTCACCATAGATAGCCTCTTTGTCCCCAATCCAGCACAAGGCT 265900 Query 17159 CACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAA--ATAATTTCTCTT 17216 || || || || | ||| | |||| ||||||||| ||||| |||| | || ||| ||| Sbjct 265901 CAATCTGCGTTCTTCTTGACGCAAGGCATCGTTTCGATGGCATTAAAGAGAAATTCCCTT 265960 Query 17217 TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276 | | | | || | || || || || || || || || |||||||| || ||||||| Sbjct 265961 TCTTTGGCA--TCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 266018 Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT 17336 | |||||||| || || || | || || || | |||||| | || |||||| | Sbjct 266019 TTTCCATGGCAATTTGGAAGACATAGAAACAGCAGGCTTCTGTAATCTGAACTATTTGGC 266078 Query 17337 AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA 17396 ||||| ||| | | |||||| || || ||||| || || || || || || ||| | Sbjct 266079 TAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCAGAA 266138 Query 17397 TATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGG 17456 | | || |||||| | || || || | || ||||| || | || |||| Sbjct 266139 GACGGGATATAAAATATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCTGAATGTCCTTGG 266198 Query 17457 ATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAA 17516 | | ||||| || |||| |||||| || |||| |||||||||||||||| | ||| | Sbjct 266199 ACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCTGCCTTTTTATACATCTGCCAGA 266258 Query 17517 TATCATTGTATTGTATGGGGAATACAACA 17545 |||||| ||| | |||||||| || ||| Sbjct 266259 TATCATGGTACTCGATGGGGAAGACGACA 266287 >seq1685 Length=141252148 Score = 237 bits (262), Expect = 2e-57 Identities = 515/764 (67%), Gaps = 9/764 (1%) Strand=Plus/Minus Query 16778 CCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAG 16837 |||||||| || | ||| || || ||||| || || ||||| ||||| ||| Sbjct 47457133 CCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAA 47457074 Query 16838 TTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACC 16897 ||||| || || || || || | || || || | ||| || ||||| ||| Sbjct 47457073 TTCATCCCAATGAGCTTCACAGGCAAGGCCTCGGTGAGGAATTCCTGTTCTATCTGAACA 47457014 Query 16898 GCTTCCTTAATAATA-CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAA 16956 || | |||| || || || ||| ||||| || || | ||| || ||||| || Sbjct 47457013 GCATTGATAATTATTTCTCTCA-CTCTCTCCTCCGATAGTTTGTGTACCAGGTGTTTGAA 47456955 Query 16957 CATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAA 17016 ||||| || || ||||| | ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 47456954 CATCAAGCAAGCAAAATC--AGTGTAAACCCTCATCTCTGCTAATAAATTCATTGGAAAA 47456897 Query 17017 TGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGA 17076 || | || |||||| |||||||||||| | ||| ||||||| || || || | || Sbjct 47456896 CGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCACAATATCGATGCAAAAGAACTGGA 47456837 Query 17077 AAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTT 17136 |||||| || || || || | || || || | | ||||| | || || || ||||| Sbjct 47456836 AAAGAAGATGCCTTCTACTGCAGCGAAGGCTACAACACGTTCACCATAGGTGGCCTCTTT 47456777 Query 17137 GTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTAT 17196 || | |||||| | |||| || || || | ||| | ||| ||||||||| || Sbjct 47456776 GTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAAT 47456717 Query 17197 GGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 ||| || | | || ||| | |||| | || || | || || || || || || || Sbjct 47456716 GGCATTGAAGAGAAATTCCC--TTTCTTTGAGATCTTTGATGTAAGTGTCAATAAGGAGA 47456659 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 || |||||||| || |||||||| |||||||| || || || || || || || |||||| Sbjct 47456658 CTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCT 47456599 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 || | || |||||| | ||||| ||| | | |||||| || || ||||| ||| Sbjct 47456598 TCTGTAATCTGAACTATTTGGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCG 47456539 Query 17375 CTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACG 17434 || || || || || ||| | ||| || |||||| | || | || | || Sbjct 47456538 CTTGCTGCAAAGAAAACCAGAACATGGGATATAAAATATCTCTCCCCGGGCTTCAGGGAT 47456479 Query 17435 CGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACT 17494 ||||| | | || ||||| | ||||| || |||| |||||| || |||| | Sbjct 47456478 TCCCAGTGC-CAATGTCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCC 47456420 Query 17495 GCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||||| |||||||| | ||| ||| ||| ||| | ||||| || Sbjct 47456419 GCCTTCTTATACATCTGCCAGATACCATGGTACTCGATGGGAAA 47456376 Score = 140 bits (154), Expect = 3e-28 Identities = 374/566 (66%), Gaps = 7/566 (1%) Strand=Plus/Minus Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018 |||| || || || | || ||||| ||||| || ||||||| |||||| | ||||||| Sbjct 130531241 TCAGGCAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTGAAAAGTTCACTGGAAAATG 130531182 Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078 | | || |||||| |||| ||||||| | ||| |||||| || || || ||||||| Sbjct 130531181 TGAGGCCAGGCATCAGTCCTTGTTTCTTGAGCCAGAATATCAATGCAAAAGAACCAGAAA 130531122 Query 17079 AGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT 17138 |||| | | || || ||||| || | ||||| | | || ||||||||| Sbjct 130531121 AGAAGGTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACGTCTTTGT 130531062 Query 17139 TACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGG 17198 | | |||||| | ||||| | || || | ||| | | | ||||||||| | || Sbjct 130531061 TCCCAATCCAACACAAGACCCAACCTGCCTTCTTCTTGACAC-AGGCATCGTTTCAACGG 130531003 Query 17199 CCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCT 17256 | || | |||| ||| |||| | ||| || | |||| || || || || || || Sbjct 130531002 CATTGAAGATAAATTCCCTTTCT-TTGT-TATCTTTAATATGCG--TCAATAAGGAGACT 130530947 Query 17257 GTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTC 17316 | || || || |||||||| || || || || || || || || ||||| || ||| Sbjct 130530946 ATTTATGTCAGAATGTATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTC 130530887 Query 17317 CGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCT 17376 | || |||||||| ||| ||||| | | ||||| | | || || || | Sbjct 130530886 TGTAATCTGAACTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTATTATCCCATCACA 130530827 Query 17377 CGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG 17436 || || || || |||| ||||| || |||||| ||| || || | || | Sbjct 130530826 TGCTGCAAAGAAAGCCAGAATATGGGATATAAAATATCTTTACTCAGGCTTCAGGGCTTC 130530767 Query 17437 CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGC 17496 ||||| | | || ||||| | ||||| || | || |||| ||| || || | Sbjct 130530766 CCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAGACCTCTAC 130530707 Query 17497 CTTTTTATACATATTCCAAATATCAT 17522 || |||||||| ||||||||||||| Sbjct 130530706 TTTCTTATACATTTTCCAAATATCAT 130530681 >seq1399 Length=81552678 Score = 102 bits (112), Expect = 8e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| |||||||| |||||||| || |||||||| | || |||||| ||||||||||| Sbjct 9735778 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9735719 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| ||||||| || || || ||||||||||| || || || || | ||||| | Sbjct 9735718 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 9735659 Query 17106 C 17106 | Sbjct 9735658 C 9735658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517432490409120