Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq192 100 2e-16 seq1399 95.1 1e-14 seq565 91.5 1e-13 >seq192 Length=157873769 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||| | ||||| | ||||| || ||||| ||| | | || |||| | Sbjct 100760455 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCAAGACTGAACTC 100760514 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || | | | | || | ||| || || ||||| ||||| | || ||| Sbjct 100760515 TCGGATATGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 100760574 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 | |||||||| |||||||| ||||| |||||||||||| ||| || | || ||| Sbjct 100760575 AAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTAC 100760634 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 | |||||| ||||| ||||||||||| | ||||| Sbjct 100760635 AGTATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 100760669 >seq1399 Length=81552678 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||| | ||||| | | ||| || ||||| ||| ||| | ||| || Sbjct 71371198 AAAATGCAGATTTTCGTGAAAACCCTTATGGGGAAGACCATCACCCTCGAGGCTGAATCC 71371139 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | | || | ||| || || ||||| ||||| | || ||| Sbjct 71371138 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 71371079 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || ||||||| |||||||| ||||| |||||||||||| ||| || | | ||| Sbjct 71371078 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGGCTAC 71371019 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 |||||||| || || ||||||||||| | ||||| Sbjct 71371018 AATATTCAAAAAGAGTCTACTCTTCATTTTGTGTT 71370984 >seq565 Length=117381234 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||| | ||||| | || || || ||||| ||| ||| |||||| Sbjct 72458620 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGATGAACCC 72458679 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || | | | | || | ||| || || ||||| ||||| | || ||| Sbjct 72458680 TCGGATATGATAGAAAATGTAAAGGCCAAGATCCGGGATAAGGAAGGAATTCCTCCTGAT 72458739 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || |||||||| |||||||| ||||| || ||||||||| ||| || | | ||| Sbjct 72458740 CAGCAAAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTAACTAC 72458799 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 |||||||| ||||| |||| |||||| | ||||| Sbjct 72458800 AATATTCAAAAGGAGTCTATTCTTCATCTTGTGTT 72458834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428244727488020