Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq254 185 1e-41 seq334 167 3e-36 >seq254 Length=152096393 Score = 185 bits (204), Expect = 1e-41 Identities = 562/859 (65%), Gaps = 12/859 (1%) Strand=Plus/Minus Query 176396 GGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAA 176455 ||||||| | | |||||||| || ||||||| |||| || | || || | || || Sbjct 106272088 GGGCAATGTGGTGGTGGTGATGATCCTCATAAG-TACAGGAGGCTCCGAATTATGACCAA 106272030 Query 176456 CATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTG 176515 ||| | ||| | ||| |||| || || ||| |||| || || || || | || || || Sbjct 106272029 CATCTACCTGCTCAACCTGGCTATTTCGGACCTGCTCTTCCTCTTCACCCTTCCGTTCTG 106271970 Query 176516 GATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCT 176575 ||| |||||||| | | ||| | ||| ||| || | | ||||||| || || Sbjct 106271969 GATCCACTATATCAGGGGG---CATAACTGGGTTTTCGGCCATGGCATGTGTAAGCTCCT 106271913 Query 176576 CAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGT 176635 | || | | ||||| |||||||| || |||||| ||| |||||||| || | Sbjct 106271912 CTCAGGGTTTTATTACACAGGCTTGTACAGCGAGATCTTTTTCATAATCCTGCTGACGAT 106271853 Query 176636 AGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTG 176695 |||||||| || || ||||| ||||||| ||| | || |||| || || | Sbjct 106271852 CGACAGGTACCTGGCCATTGTCCATGCTGTGTTTGCACTTAGAGCCCGAACCGTCACTTT 106271793 Query 176696 TGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATT 176755 ||| | | ||| | | |||||| | ||||| | | | | |||||||| Sbjct 106271792 TGGTGTCATCACCAGCATCGTCACCTGGGGCCGGGCAGTGCTAGCAGCTTTTCCTGAATT 106271733 Query 176756 TTTCTTTCATGGACACCAAGATGACAATGGTAGGGT-TCAGTGTGATCCTTACTACCCAG 176814 | |||| ||| |||| | | | || | | || | || ||||||| Sbjct 106271732 TATCTTCAATGAGATTGAAGA-GTTGGTTGAAGAGACTTTTTGCAGTGCTGTTTACCCAG 106271674 Query 176815 AGATGTCTACAAATGTTTGGAGGCGCGCCCACG--TTGCAAAGGTGATTATGTTAAGTCT 176872 || | | || ||||||| |||| ||| || ||| | || |||| Sbjct 106271673 AGGATACAGTATATAGCTGGAGGCATTTCCACACTTTGAGAA--TGACCACCTTCTGTCT 106271616 Query 176873 CATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAG 176932 | || | ||||||||| ||||||| |||||||| | ||| |||| || ||| |||| Sbjct 106271615 CGTTCTCCCTCTGCTCGTTATGGCCATCTGCTACACAGGAATCATCAAAACGCTGCTGAG 106271556 Query 176933 GCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTA 176992 | ||||||| || || ||||||||||||||| ||||| ||||||||||||| | | Sbjct 106271555 GTGCCCCAGTAAAAAAAAGTACAAGGCCATCCATCTCATTTTTGTCATCATGGCCGTGTT 106271496 Query 176993 TTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTC-ACGCAACCC 177051 ||| |||| |||||||||||||| | | |||||| || ||| ||| || | || | Sbjct 106271495 TTTCATTTTCTGGACACCCTACAATGTGGCTCTCCTTCTCTCTTCCTATCGATCCATCTT 106271436 Query 177052 TTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAA 177111 || | | || | |||| ||||| | ||||| ||| || | | ||| | Sbjct 106271435 TTTTGGAAATG-ACTGTGAGCGGAGCAAGCATCTGGACCTGGTCATGTCGGTGACAGAGG 106271377 Query 177112 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 177171 | |||||| | ||||| ||| | ||||| ||||||||||| || | || |||| || Sbjct 106271376 TGATCGCCTACTCCCACTGCTGCGTGAACCCGGTGATCTACGCCTTTGCTGGAGAGAGGT 106271317 Query 177172 TTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACA 177231 | | | ||||| |||||||||||||| || || | | |||| ||| ||| Sbjct 106271316 TCCGGAAGTACCTGCGCCACTTCTTCCACAGGCACATGCTCTTGCACCTGGGCAGATACT 106271257 Query 177232 TCCCCTTCCTGTCTGGTGA 177250 |||| ||||| || |||| Sbjct 106271256 TCCCATTCCTTCCTAGTGA 106271238 Score = 185 bits (204), Expect = 1e-41 Identities = 562/859 (65%), Gaps = 12/859 (1%) Strand=Plus/Minus Query 9510 GGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAA 9569 ||||||| | | |||||||| || ||||||| |||| || | || || | || || Sbjct 106272088 GGGCAATGTGGTGGTGGTGATGATCCTCATAAG-TACAGGAGGCTCCGAATTATGACCAA 106272030 Query 9570 CATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTG 9629 ||| | ||| | ||| |||| || || ||| |||| || || || || | || || || Sbjct 106272029 CATCTACCTGCTCAACCTGGCTATTTCGGACCTGCTCTTCCTCTTCACCCTTCCGTTCTG 106271970 Query 9630 GATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCT 9689 ||| |||||||| | | ||| | ||| ||| || | | ||||||| || || Sbjct 106271969 GATCCACTATATCAGGGGG---CATAACTGGGTTTTCGGCCATGGCATGTGTAAGCTCCT 106271913 Query 9690 CAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGT 9749 | || | | ||||| |||||||| || |||||| ||| |||||||| || | Sbjct 106271912 CTCAGGGTTTTATTACACAGGCTTGTACAGCGAGATCTTTTTCATAATCCTGCTGACGAT 106271853 Query 9750 AGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTG 9809 |||||||| || || ||||| ||||||| ||| | || |||| || || | Sbjct 106271852 CGACAGGTACCTGGCCATTGTCCATGCTGTGTTTGCACTTAGAGCCCGAACCGTCACTTT 106271793 Query 9810 TGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATT 9869 ||| | | ||| | | |||||| | ||||| | | | | |||||||| Sbjct 106271792 TGGTGTCATCACCAGCATCGTCACCTGGGGCCGGGCAGTGCTAGCAGCTTTTCCTGAATT 106271733 Query 9870 TTTCTTTCATGGACACCAAGATGACAATGGTAGGGT-TCAGTGTGATCCTTACTACCCAG 9928 | |||| ||| |||| | | | || | | || | || ||||||| Sbjct 106271732 TATCTTCAATGAGATTGAAGA-GTTGGTTGAAGAGACTTTTTGCAGTGCTGTTTACCCAG 106271674 Query 9929 AGATGTCTACAAATGTTTGGAGGCGCGCCCACG--TTGCAAAGGTGATTATGTTAAGTCT 9986 || | | || ||||||| |||| ||| || ||| | || |||| Sbjct 106271673 AGGATACAGTATATAGCTGGAGGCATTTCCACACTTTGAGAA--TGACCACCTTCTGTCT 106271616 Query 9987 CATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAG 10046 | || | ||||||||| ||||||| |||||||| | ||| |||| || ||| |||| Sbjct 106271615 CGTTCTCCCTCTGCTCGTTATGGCCATCTGCTACACAGGAATCATCAAAACGCTGCTGAG 106271556 Query 10047 GCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTA 10106 | ||||||| || || ||||||||||||||| ||||| ||||||||||||| | | Sbjct 106271555 GTGCCCCAGTAAAAAAAAGTACAAGGCCATCCATCTCATTTTTGTCATCATGGCCGTGTT 106271496 Query 10107 TTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTC-ACGCAACCC 10165 ||| |||| |||||||||||||| | | |||||| || ||| ||| || | || | Sbjct 106271495 TTTCATTTTCTGGACACCCTACAATGTGGCTCTCCTTCTCTCTTCCTATCGATCCATCTT 106271436 Query 10166 TTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAA 10225 || | | || | |||| ||||| | ||||| ||| || | | ||| | Sbjct 106271435 TTTTGGAAATG-ACTGTGAGCGGAGCAAGCATCTGGACCTGGTCATGTCGGTGACAGAGG 106271377 Query 10226 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 10285 | |||||| | ||||| ||| | ||||| ||||||||||| || | || |||| || Sbjct 106271376 TGATCGCCTACTCCCACTGCTGCGTGAACCCGGTGATCTACGCCTTTGCTGGAGAGAGGT 106271317 Query 10286 TTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACA 10345 | | | ||||| |||||||||||||| || || | | |||| ||| ||| Sbjct 106271316 TCCGGAAGTACCTGCGCCACTTCTTCCACAGGCACATGCTCTTGCACCTGGGCAGATACT 106271257 Query 10346 TCCCCTTCCTGTCTGGTGA 10364 |||| ||||| || |||| Sbjct 106271256 TCCCATTCCTTCCTAGTGA 106271238 Score = 159 bits (176), Expect = 4e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 |||||||||| ||| || | |||||| || ||||||| ||||||||| |||||||| ||| Sbjct 60593021 AGGCCCGTGATGTGTGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 60592962 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || || |||||||| ||||| | |||||||||||||||||| ||||| | | | || Sbjct 60592961 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 60592902 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||||||||||| ||| ||||| || ||||| ||||| Sbjct 60592901 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCAT 60592861 Score = 89.7 bits (98), Expect = 6e-13 Identities = 220/327 (67%), Gaps = 15/327 (5%) Strand=Plus/Plus Query 9472 CCCGCCCTGTATCTGCTTG-TGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGT--- 9527 ||| | ||||| || |||| | ||| || |||| || | || || ||| | ||||| Sbjct 106321863 CCCCCTCTGTA-CTCCTTGGTATTTGTCATTGGCCTGGTTGGAAACATCCTGGTGGTCCT 106321921 Query 9528 GATTATTGT-CATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACT 9586 | | |||| || ||||| || | |||||||| | || | ||| | || | ||| Sbjct 106321922 GGTCCTTGTGCA----ATACAAGAGGCTCAAAAACATGACCAGCATCTACCTCCTGAACC 106321977 Query 9587 TGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATAT-TGGA 9645 |||| || |||||| |||| || || || || |||| || ||||| |||| | | || Sbjct 106321978 TGGCCATTTCTGACCTGCTCTTCCTGTTCACGCTGCCCTTCTGGATCGACTACAAGTTGA 106322037 Query 9646 ATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTAC 9705 | | |||| ||| ||||||| | || ||||||| | ||| || | | |||| Sbjct 106322038 AGG----ATGACTGGGTTTTTGGTGATGCCATGTGTAAGGTCCTCTCTGGGTTTTATTAC 106322093 Query 9706 ATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCT 9765 | ||||||| || |||||| |||||||||||| || | |||||||| || || Sbjct 106322094 ACAGGCTTGTACAGTGAGATCTTTTTCATCATCCTGCTGACGATTGACAGGTACCTGGCC 106322153 Query 9766 GTTGTCTATGCTGTAACTGCTTTGAGG 9792 | || |||| || ||| ||| || Sbjct 106322154 ATCGTTCATGCCGTGTTTGCCTTGCGG 106322180 Score = 89.7 bits (98), Expect = 6e-13 Identities = 220/327 (67%), Gaps = 15/327 (5%) Strand=Plus/Plus Query 176358 CCCGCCCTGTATCTGCTTG-TGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGT--- 176413 ||| | ||||| || |||| | ||| || |||| || | || || ||| | ||||| Sbjct 106321863 CCCCCTCTGTA-CTCCTTGGTATTTGTCATTGGCCTGGTTGGAAACATCCTGGTGGTCCT 106321921 Query 176414 GATTATTGT-CATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACT 176472 | | |||| || ||||| || | |||||||| | || | ||| | || | ||| Sbjct 106321922 GGTCCTTGTGCA----ATACAAGAGGCTCAAAAACATGACCAGCATCTACCTCCTGAACC 106321977 Query 176473 TGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATAT-TGGA 176531 |||| || |||||| |||| || || || || |||| || ||||| |||| | | || Sbjct 106321978 TGGCCATTTCTGACCTGCTCTTCCTGTTCACGCTGCCCTTCTGGATCGACTACAAGTTGA 106322037 Query 176532 ATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTAC 176591 | | |||| ||| ||||||| | || ||||||| | ||| || | | |||| Sbjct 106322038 AGG----ATGACTGGGTTTTTGGTGATGCCATGTGTAAGGTCCTCTCTGGGTTTTATTAC 106322093 Query 176592 ATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCT 176651 | ||||||| || |||||| |||||||||||| || | |||||||| || || Sbjct 106322094 ACAGGCTTGTACAGTGAGATCTTTTTCATCATCCTGCTGACGATTGACAGGTACCTGGCC 106322153 Query 176652 GTTGTCTATGCTGTAACTGCTTTGAGG 176678 | || |||| || ||| ||| || Sbjct 106322154 ATCGTTCATGCCGTGTTTGCCTTGCGG 106322180 >seq334 Length=143122389 Score = 167 bits (184), Expect = 3e-36 Identities = 135/159 (85%), Gaps = 7/159 (4%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| ||||||| |||||||| || ||||| ||||||||||||||||| | ||| Sbjct 54997027 CAGCGCCGTAGCCTCAGCCTGAGGGCCTTCAGCTTCTCCCCCAGGGAGTTCACATGCTCC 54996968 Query 138142 TT--TTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACT 138199 || | |||| || || |||||||| || |||||||||||||||||||||||||||| Sbjct 54996967 TTGATGTCTGG---GT-CT-TGGTTCTCAGCTTGGGGCATCACCTCCTCCAGGTAAAACT 54996913 Query 138200 GGATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 ||||||||||||||| ||| ||||| ||||||||||||| Sbjct 54996912 GGATCATCTCAGACAAGGCTTGGCAACCCAGGTAACCCT 54996874 Score = 105 bits (116), Expect = 8e-18 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 137921 CTCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACT 137980 || |||||| ||||| | ||||||||||| ||||||||||| |||||||| ||||||| Sbjct 54999298 CTTAGTTTTGTATCTTCATTGTCATGTAGGCTTCTATGTAGTTGATGAAGATATCAAACT 54999239 Query 137981 CGCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 | |||||||| ||||||| ||||| || ||||||| Sbjct 54999238 CACTCATGGCTTTGTAGATGCCTTTCTCTTGGAGCT 54999203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589947838715360