Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq1668 437 1e-117 seq254 316 2e-81 seq192 129 7e-25 >seq1668 Length=32716333 Score = 437 bits (484), Expect = 1e-117 Identities = 472/619 (76%), Gaps = 6/619 (1%) Strand=Plus/Plus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| |||||||| | ||| | | | |||| || ||| | |||||||||||| Sbjct 13748034 AGCAGGGCTTCGATGTCAGACTCGATGTTAATGGTCCGGAAGCCGCGGCTGTACCTGCAT 13748093 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 |||||| | ||||| ||||||| ||||| ||| ||||||||||| || |||||||| Sbjct 13748094 ACGGGCACACAGTCAGGGCCCACCAGGAACTCCTCAAAGTTCCAGGCAACATCGTTGCGA 13748153 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 |||| ||||||| || ||||||| ||||||| ||| ||||| | ||||||||| Sbjct 13748154 CACAACGGAGACCGGGTGATGAGCTTGGGGTCGGTCATGAGCGCAGTGGCGTCGTCGCTG 13748213 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 || || ||| || |||| || ||||||| |||| || || ||| |||||||| || Sbjct 13748214 GGGGCTGGCCGG-CCTCCCGCAGGAAGGTGAAGTCAGGGTGCGCCGCCGCACCGTTCCCC 13748272 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 |||||||||||| ||||||| ||||| ||||||||||| | ||||| ||||| | || Sbjct 13748273 TCGCACTTCTCGGAGAGCATGAAGTTGGGCTCGAAGCCATCACCAGGTCGGACATATTTG 13748332 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGG 83416 |||||| || ||||| | |||| ||||| | |||| || || |||||||| |||||| Sbjct 13748333 AGGGAATTCAGAATCTCTTCGTTCTTGGCGTCT-CCTGATGCCCAAACTGGTTGCACGGG 13748391 Query 83417 AACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTG 83476 || || ||||| ||||| ||||| | || |||||||||||||||||||||||||| ||| Sbjct 13748392 AAGCCGAGCACCACCAGGCCCCGGGGCCCGAGGCGCCGCTGCAGCTCGTTCATCTGGGTG 13748451 Query 83477 TACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCC 83536 || |||| | ||||| | |||||||||||||| || |||||||| || | ||| | || Sbjct 13748452 TAGTCCCTGCCCGTGGTGCCTCAGAGGGACGCCACATTCTCGATAAGTAGCACCTTGTCC 13748511 Query 83537 CGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCTGAGAAGGCGTAC 83596 || | | |||| | ||||||||| || || |||| | |||||| || || ||||| ||| Sbjct 13748512 CGCAGGGAGCCCAGGCTCACAGGCTCCCCGCCGGCCAGCGGGCGCGCGGAAAAGGCTTAC 13748571 Query 83597 ACAGATCTGGTC-TCTGCCGCGGCAAGCTGTGCCGCGTACTTGGCACAGAGCTCGGAAAA 83655 || || |||| | || ||||| || ||| | || || || |||| || || || || Sbjct 13748572 ACCGA-CTGGGCATCCGCCGCCGCTAGCCGAGCAGCACACATGGCGCAACTGTCCGAGAA 13748630 Query 83656 GCGCGGGAAGCGGGCCCCG 83674 || ||| ||| |||||| Sbjct 13748631 GCTAGGGGAGC--GCCCCG 13748647 >seq254 Length=152096393 Score = 316 bits (350), Expect = 2e-81 Identities = 273/338 (81%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCG 83115 ||||||||| |||||||| ||||| | | | | ||||||| ||||| ||||||||||||| Sbjct 103348773 GAGCAGGGCTTCGATGTCAGGCTCGATGTCAATGGTCTGGAAGCGGCGGCTGTACCTGCG 103348714 Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175 | |||| ||||||| ||||||| ||||||||| ||||||||||| || |||||||| Sbjct 103348713 TAGGGGCACACCGTCAGGGCCCACCAGGAACTTCTCAAAGTTCCAGGCAACATCGTTGCG 103348654 Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCT 83235 ||||| |||||||||| ||||||| ||||||| ||| || | | ||||||||| Sbjct 103348653 ACACACCGGAGACCAGGTGATGAGCTTGGGGTCGGTCATAAGTGCAGTGGCGTCGTCGCT 103348594 Query 83236 AGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGAC 83295 || || ||||||||||| || |||||||||||||| || || |||| |||||||| || Sbjct 103348593 GGGGGCTGGCAGGGCCTCCCGCAGGAAGGCGAAGAGAGGGTGCGCCCCCGCACCGTTCAC 103348534 Query 83296 CTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTT 83355 ||||||||||||||||||||| ||||| |||||||| || ||||| ||||||| ||| Sbjct 103348533 CTCGCACTTCTCGAAGAGCATGAAGTTGGGCTCGAACCCACCACCAGGTCGGACGTACTT 103348474 Query 83356 CAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 |||||| || ||||| | |||| |||||| |||| Sbjct 103348473 GAGGGAATTCAGAATCTCTTCGTTCTTGGCGTTCTCCT 103348436 Score = 208 bits (230), Expect = 9e-49 Identities = 220/285 (77%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || || |||||||| |||||||| || ||||| ||||| ||||| | || |||| Sbjct 103348164 CCTGATGCCCAAACTGGTTGCACGGGAAGCCGAGCACCACCAGGCCCCGGGGCCCGAGGC 103348105 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 |||||||||||||||||||||| ||||| |||||||||||| | |||||||||||||| | Sbjct 103348104 GCCGCTGCAGCTCGTTCATCTGGGTGTAGTCCCGGACCGTGGTGCCTCAGAGGGACGCCA 103348045 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 | |||||||| || | | | |||||| || |||| | ||||||||| || || |||| Sbjct 103348044 CATTCTCGATAAGTAGTATCTTGCCCCG-CAGGAGCCCAGGCTCACAGGCTCCCCGCCGG 103347986 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGATCTGGTC-TCTGCCGCGGCAAGCTGTGCC 83629 | |||||| || || ||||| ||||| || |||| | || ||||| || ||| | || Sbjct 103347985 CCAGCGGGCGCGCGGAAAAGGCTTACACCGA-CTGGGCATCCGCCGCCGCTAGCCGAGCA 103347927 Query 83630 GCGTACTTGGCACAGAGCTCGGAAAAGCGCGGGAAGCGGGCCCCG 83674 || || |||| || || || |||| ||| ||| |||||| Sbjct 103347926 GCACACATGGCGCAACTGTCCGAGAAGCTAGGGGAGC--GCCCCG 103347884 >seq192 Length=157873769 Score = 129 bits (142), Expect = 7e-25 Identities = 208/291 (71%), Gaps = 15/291 (5%) Strand=Plus/Minus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || |||| | ||| || ||| ||| ||||||||| ||| ||| Sbjct 94250767 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCGCGCCTGC 94250709 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || |||| || |||||||| || |||||||||| || ||| | ||||||| Sbjct 94250708 TGGTGCACCTGTTCCCCGAGCTCTTCACGCACGAGAACCTGCGCAAGCAGTACAACTGCA 94250649 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACTAT 50587 ||||||| |||||||| |||| || |||||| || | | |||| ||||| Sbjct 94250648 GCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCGTCCCGTATCAAGCTCATCCGCCACTAC 94250590 Query 50588 GTGCAGTTGCTGCACCCGGCGGCGCGC----AACGAGCGCGTGTGGATCACAAAGTTCCT 50643 |||||| |||| ||||| ||||| ||||| ||||| |||| | ||||| | Sbjct 94250589 GTGCAGCTGCTCTACCCG----CGCGCCAAAAACGACCGCGTCTGGACCCTGGAGTTCGT 94250534 Query 50644 GGCGTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 || ||||| ||||||||||||||||| | |||||| || |||||| Sbjct 94250533 GGGCAAACTGGATGAGCGCTGCCGGCGCCG--GGACACGGAGCAAAGGCGC 94250485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608663747459360