Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq406 1553 0.0 seq1 132 3e-26 >seq406 Length=121039945 Score = 1553 bits (1722), Expect = 0.0 Identities = 1368/1697 (81%), Gaps = 53/1697 (3%) Strand=Plus/Plus Query 107097 AGCTGGTTTGCAGCATCAGGTTACAGATGTCCATCCACAA-----------GGGTCTT-- 107143 |||| ||||| || ||||||||||||| |||||| |||| ||| ||| Sbjct 78828771 AGCTAGTTTGTAGGGTCAGGTTACAGATCTCCATCAACAAACCAGATGTAAGGGGCTTCT 78828830 Query 107144 AGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACCATCACTCTG 107203 ||| ||| ||| ||| |||||||||||| | |||| || | | ||| || ||| | || Sbjct 78828831 AGGTAGGTCTTTACTAAGGATATTTGTCCAGGTAAGAAATATTT-TTTGCCGTCAGTTTG 78828889 Query 107204 GAGTTGAACTTGATGTT-CTGG-----ATTAGTTTGTAATTAAAGGCATTTTGTTCTGTC 107257 || ||| |||||||||| |||| |||||||||||| | || |||||||||||||| Sbjct 78828890 GAATTGCACTTGATGTTTCTGGGAATGATTAGTTTGTAACTGGAGCCATTTTGTTCTGTC 78828949 Query 107258 CAAGGATC---TCCTCCTCCACCTTGCCTGTGCCCAAACTCT-CCTGATCTCCCATCCCA 107313 ||||||| ||||||||| |||| ||||||| | ||| |||| |||||||| | Sbjct 78828950 CAAGGATTGTGTCCTCCTCCTCCTTCCCTGTGCTCGGTCTCCACCTG-TCTCCCATTCTG 78829008 Query 107314 TGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGGCCCTGGGCT 107373 ||| ||||| | | |||||| || || |||| | ||| | |||||| |||||||| Sbjct 78829009 TGACGATGGTTCAGCGGAAGA-GA--CTCTGCCAGCAGCATTACTTGTGGGTCCTGGGCT 78829065 Query 107374 GCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAATGTGATGTAG 107433 ||||||||||||||||| ||| |||||| |||||| ||||||| || ||||| | Sbjct 78829066 GCTATATGCTGCTGGCCACTGTGGCTCTGAAACTTTCTTTCAGGTTGAAGTGTGACTCTG 78829125 Query 107434 ATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACATGTTGTACA 107493 | |||| ||||||||||||||| | || || ||| |||||||| | || ||||||| Sbjct 78829126 ACCAGTTGGGTCTGGAGTCCAGGGAATCTCAAAGCCAGTACTGTAGGAATATCTTGTACA 78829185 Query 107494 ATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGGGACC 107553 | |||||| |||||||||||||| || ||||||||||| ||| |||| |||||||||| Sbjct 78829186 GTTTCCTGAAACTGCCAGCAAAGAGGTCTATCAACTGTTCAGGGGTCACCCGAGGGGACC 78829245 Query 107554 AGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTC 107613 | || |||||| | ||||| | || | |||||||| || ||||| ||||| |||| Sbjct 78829246 AAGAGGCAGTGTTTCAGGCTATTCTGAATAACCTGGAGGTCAAGAAGAAGCGAGAGCCTT 78829305 Query 107614 TCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGA 107673 |||| | |||| | |||||| | | |||||||||||||||||||||||||| |||||| Sbjct 78829306 TCACAGACACCCACTACCTCTCCCTCACCAGAGACTGTGAGCGCTTCAAGGCGGAAAGGA 78829365 Query 107674 AGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGG 107733 |||||||||||||||||||||| ||||||||| | || ||||| |||| ||||| |||| Sbjct 78829366 AGTTCATACAGTTCCCACTGAGCAAAGAAGAGGTGGAGTTCCCTGTTGCATACTCCATGG 78829425 Query 107734 TGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGA 107793 || | |||||||||||||||||||||||| |||| |||||||| |||||||||||||||| Sbjct 78829426 TGATTCATGAGAAGATTGAAAACTTTGAAAGGCTACTGCGAGCTGTGTATGCCCCTCAGA 78829485 Query 107794 ACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGG 107853 |||||||||| ||||| ||||||| |||||||||||| |||||||||||||| ||||| | Sbjct 78829486 ACATATACTGCGTCCATGTGGATGAGAAGTCCCCAGAAACTTTCAAAGAGGCAGTCAAAG 78829545 Query 107854 CCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATG 107913 | |||||||| |||||||| ||||||||||| ||||||||| |||| | ||||||||||| Sbjct 78829546 CAATTATTTCATGCTTCCCAAATGTCTTCATAGCCAGTAAGCTGGTTCGGGTGGTTTATG 78829605 Query 107914 CCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAG 107973 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 78829606 CCTCCTGGTCCAGGGTGCAAGCTGACCTCAACTGCATGGAAGACTTGCTCCAGAGCTCAG 78829665 Query 107974 TGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCG 108033 |||||||||| ||||| |||||||| || ||||| ||||| || ||||||| |||||||| Sbjct 78829666 TGCCATGGAAATACTTCCTGAATACGTGTGGGACGGACTTTCCTATAAAGAGCAATGCCG 78829725 Query 108034 AGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTT 108093 ||||||||| ||| |||||||||||||| || | ||| || |||||||| |||||||||| Sbjct 78829726 AGATGGTCCAGGCTCTCAAGATGTTGAATGGGAGGAATAGCATGGAGTCAGAGGTACCTT 78829785 Query 108094 CTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAG---GTGACAGACACACTGTACC 108150 || || ||| ||| ||||||||||||| || |||| |||| ||||||| | |||| Sbjct 78829786 CTAAGCAGAAAGAAACCCGCTGGAAATACCACTTTGAGGTAGTGAGAGACACATTATACC 78829845 Query 108151 CTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCT 108210 |||| || || |||||| ||||||||| |||||||| | ||||| ||||||||||| | Sbjct 78829846 TAACCAACAGGAAGAAGGATCCTCCCCCTTATAATTTAACTATGTTTACAGGGAATGCGT 78829905 Query 108211 ATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGAC 108270 || ||||||| || |||| |||||||||||||| || | ||||||||||| ||| || Sbjct 78829906 ATATTGTGGCTTCCCGAGATTTTGTCCAACATGTTTTGAAGAACCCTAAATCTCAACAAC 78829965 Query 108271 TGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGC 108330 || |||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct 78829966 TGATTGAGTGGGTAAAAGATACCTATAGCCCTGATGAACACCTCTGGGCCACCCTTCAGC 78830025 Query 108331 GTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGA 108390 |||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||| Sbjct 78830026 GTGCATGGTGGATGCCTGGCTCTGTTCCCAACCACCCCAAGTACGACATCTCAGACATGA 78830085 Query 108391 CTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGC 108450 || | || |||||||| |||||||||||| | | |||||||| || | ||| || | Sbjct 78830086 CTTCTATTGCCAGGCTGGTCAAGTGGCAGGATCTTGAGGGAGACATCGATAAGGGTGCTC 78830145 Query 108451 CTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACC 108510 ||||||| ||||||||||||||||| | | |||| |||| |||| ||||| |||||| Sbjct 78830146 CTTATGCTCCCTGCTCTGGAATCCACCAGCGGGCTGTCTGTGTTTATGGGGCTGGGGACT 78830205 Query 108511 TGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATG 108570 || | |||||||| || ||||||||||| ||||| |||||||||||||| | ||| |||| Sbjct 78830206 TGCATTGGATTCTTCAAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGATG 78830265 Query 108571 ATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTGAAC 108630 |||| | || |||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 78830266 ATAATGCTCTTCAGTGCTTAGAAGAGTACCTACGTTATAAGGCCATTTATGGGACTGAAC 78830325 Query 108631 TTTGAG-----CT------GCA-------CTGT-GGGCCAGGGACTGTGCCAACATGCCC 108671 |||||| || ||| |||| |||| || | ||| | ||||||| | Sbjct 78830326 TTTGAGACACACTATGAGGGCATTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC 78830385 Query 108672 AGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGCATCCCCC 108731 || | | |||| ||||| ||||||| ||| |||||| || ||| | |||| ||| Sbjct 78830386 AGAACTTGCTGGGACTGT---GGGTGGGAGACCAGGGCTTTGCAATTCGTGGCGTCCTTT 78830442 Query 108732 AGGGTCAGAGGGCTGCT 108748 || | ||||||||||| Sbjct 78830443 GGGATAAGAGGGCTGCT 78830459 Score = 96.9 bits (106), Expect = 2e-15 Identities = 194/277 (70%), Gaps = 13/277 (5%) Strand=Plus/Minus Query 108286 AAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGA-TG 108344 ||||||| || |||||||| || || ||||| |||||| | ||| || ||| || | | Sbjct 21318556 AAGACACATACAGCCCCGATGAGCATCTCTGAGCCACCATCCAGAGTATTCC-TGAAGTC 21318498 Query 108345 CCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCC 108401 |||||||| | ||| ||||| ||||| || | || |||||| ||| | ||| Sbjct 21318497 CCTGGCTCACTCTCCACAAGCCAT---AAGTACAACTTGTCTGACATGCATGCAGTTGCC 21318441 Query 108402 AGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCC 108461 || | ||||||||||||||| ||||| ||||| || ||| || || || ||||| Sbjct 21318440 TGGTTTGTCAAGTGGCAGTACTTGGAGGGTGATGTTTCCAAGGGTGCTCCCTACCCACCC 21318381 Query 108462 TGC-TCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGAT 108520 ||| | || | ||| || | | | ||||||| | | || || ||| || | ||||| Sbjct 21318380 TGCGACAGGGA-CCA-CG--TGCACTTGTGCATTTTCAGAGCTGGTGACTTGAAATGGAT 21318325 Query 108521 TCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 || || || |||||| | || || | ||| ||||| Sbjct 21318324 GCTGCACAAGCATCACTTGTTTGCCAGTAAGCTTGAC 21318288 >seq1 Length=122973662 Score = 132 bits (146), Expect = 3e-26 Identities = 572/896 (64%), Gaps = 49/896 (5%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || |||||||||||| || || || || || || || || ||||| ||| | ||| Sbjct 58506501 CCCCTTAGTAAAGAAGAGGCGGAGTTTCCAATAGCATATTCTATAGTGGTTCATCACAAG 58506442 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| |||| |||||||| | ||| | ||| |||||||| | || || | Sbjct 58506441 ATTGAAATGCTTGACAGGCTGCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCATT 58506382 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAA---AGAGGCGGTCAAGGCCATTATTTCC 107864 |||||||| || ||| ||| || | | || || || | || ||| |||| Sbjct 58506381 CACGTGGACACAAAATCC---GAGGATTCCTATTTAGCTGCAGTGATGGGCATCGCTTCC 58506325 Query 107865 TGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCC 107924 || || |||||||| ||||||| |||| ||||||||||| || ||| | Sbjct 58506324 TGTTTTAGTAATGTCTTTGTGGCCAGCCGATTGGAGAGTGTGGTTTATGCATCGTGGAGC 58506265 Query 107925 AGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCA-GAGCTCAGTGCCA--TGG 107981 | || || |||||||| ||||| ||| | ||| ||| | | | | ||| | ||| Sbjct 58506264 CGCGTTCAGGCTGACCTCAACTGCATGAAGGAC---CTCTATGCAATGAATGCAAACTGG 58506208 Query 107982 AAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTC 108041 |||||||| | ||| || || | || || || || || ||||| || || ||| Sbjct 58506207 AAGTACTTGATAAATCTTTGTGGTATGGATTTTCCTATTAAAACCAACCTAGAAATTGTC 58506148 Query 108042 CTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGG---TACCTTCTGAG 108098 | |||||| |||| | ||| | |||| |||| | ||| | || || | Sbjct 58506147 AGGAAGCTCAAGTTGTTAATGGGAGAAAACAACCTGGAAACGGAGAGGATGCCATCCCAT 58506088 Query 108099 TCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGT---------------GACAGACACA 108143 ||| || | | |||||| | || |||||||| |||| ||||| Sbjct 58506087 ---AAAGAAGAAAGGTGGAAAAAGCGGTATGAGGTCGTTAATGGAAAGCTGACAAACACA 58506031 Query 108144 CTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGG 108203 | || ||| ||| ||||| | ||| | ||| | || | || Sbjct 58506030 GGG------ACTGTCAAAATGCTT---CCTCCGCTTGAAAC---ACCTCTTTTTTCTGGC 58505983 Query 108204 AATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCC 108263 | |||||| || |||| | | | | | ||| | || || | || ||| | Sbjct 58505982 AGTGCCTACTTCGTGGTCAGTAGGGAGTATGTGGGGTACGTACTACAGAATGAAAAAATC 58505923 Query 108264 CAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACC 108323 |||| | || || |||| ||||||| || ||||| || || | |||||||||||| Sbjct 58505922 CAAAAGTTTGTGGAGTGGGCGCAAGACACATACAGCCCTGATGAGTATCTCTGGGCCACC 58505863 Query 108324 CTTCAGCGTGCTCCGTGGA-TGCCTGGCTCTGTTCCTAGCCACCCC-AAGTATCACATCT 108381 | || | ||| || | | || ||||| | || |||| || |||||| | | | Sbjct 58505862 ATCCAAAGGATTCC-TGAAGTCCCGGGCTCACTCTCT-GCCAGCCATAAGTATGATTTGT 58505805 Query 108382 CAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCA 108441 | |||||| || | |||||| | ||||||||||||||| ||||| ||||| || Sbjct 58505804 CTGACATGCAAGCAGTTGCCAGGTTTGTCAAGTGGCAGTACTTTGAGGGTGATGTTTCCA 58505745 Query 108442 TGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGG 108501 ||| || || || |||||||| |||| ||||| | | | | ||||||| ||| | Sbjct 58505744 AGGGTGCTCCCTACCCACCCTGCGATGGAGTCCATGTGCGCTCAGTGTGCATTTTCGGAG 58505685 Query 108502 CCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 | || ||| || ||||||| || | | || ||| | || || || ||||||||| Sbjct 58505684 CTGGTGACTTGAACTGGATGCTGCGCCAACACCACTTGTTTGCCAATAAGTTTGAC 58505629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348194588707416