Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq683 98.7 8e-16 seq1399 95.1 9e-15 seq1044 95.1 9e-15 seq1210 82.4 6e-11 >seq683 Length=106955855 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | || || || |||| Sbjct 98906090 AGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 98906149 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| ||||| || ||| |||| || || || || || || | ||||||||| || Sbjct 98906150 TCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 98906209 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | | |||||| | ||| ||||||| ||||||| || | ||||||| | Sbjct 98906210 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 98906269 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| || | ||| || || || || ||||| Sbjct 98906270 TTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 98906301 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | || || || |||| Sbjct 98906318 AGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 98906377 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| ||||| || ||| |||| || || || || || || | ||||||||| || Sbjct 98906378 TCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 98906437 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | | |||||| | ||| ||||||| ||||||| || | ||||||| | Sbjct 98906438 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 98906497 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| || | ||| || || || || ||||| Sbjct 98906498 TTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 98906529 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | || || | |||| Sbjct 98905634 AGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCT 98905693 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| ||||| || ||| |||| || || || || || || | ||||||||| || Sbjct 98905694 TCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 98905753 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | | |||||| | ||| ||||||| |||||| || | ||||||| || Sbjct 98905754 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTT 98905813 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| || | ||| || || || || ||||| Sbjct 98905814 TTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 98905845 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | || || || |||| Sbjct 98906774 AGAACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCT 98906833 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| ||||| || || | || || || || || || || | |||||||||||| Sbjct 98906834 TCCAGCTGTTTTCCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCT 98906893 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | |||| ||||| | | | ||||||| ||||||| |||| ||||||| | Sbjct 98906894 TGGATCT-TTGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 98906952 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| || | ||| || || || || ||||| Sbjct 98906953 CTTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 98906985 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | || || || |||| Sbjct 98905862 AGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 98905921 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| | || || || || || | |||||||||||| Sbjct 98905922 TCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCT 98905981 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | |||| ||||| | | | ||||||| ||||||| || | ||||||| | Sbjct 98905982 TGGATCT-TTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 98906040 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| || || || || || ||||| Sbjct 98906041 CTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 98906073 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | || || || |||| Sbjct 98906546 AGAACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 98906605 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| ||||| || ||| |||| || || || || || || | ||||||||| || Sbjct 98906606 TCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 98906665 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | | |||||| | ||| ||||||| |||||| || | ||| ||| | Sbjct 98906666 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTAATGGTC 98906725 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || |||| || || || || || ||||| Sbjct 98906726 TTACCAGTCAGGGTCTTCACGAAGATCTGCAT 98906757 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | || || || |||| Sbjct 98907002 AGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 98907061 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | ||||| || ||| |||| || || || || || || | ||||||||| || Sbjct 98907062 TCTAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 98907121 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | | |||||| | | | ||||||| |||||| || | |||||| | Sbjct 98907122 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATTGTC 98907181 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || || |||| || || ||||| || |||||| Sbjct 98907182 TTACCAGTCAGAGTCTTCACAAAGATCTGCATT 98907214 >seq1399 Length=81552678 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || ||||| ||||| || ||||||||||| | | || | |||| Sbjct 65744035 AGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 65743976 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | |||||||||||| Sbjct 65743975 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCC 65743916 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | | | | ||||||| |||||| |||| ||||||| | Sbjct 65743915 TGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTC 65743856 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 ||||| || | ||||| || || || |||||||| Sbjct 65743855 TTGCCAGTAAGAGTTTTCACGAAGATCTGCATTTT 65743821 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | | || | |||| Sbjct 65744491 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 65744432 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | |||||| ||||| Sbjct 65744431 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCT 65744372 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | | | | ||||||| |||||| ||| | ||||||| | Sbjct 65744371 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 65744312 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||||| || || || || || ||||| Sbjct 65744311 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 65744280 >seq1044 Length=11392 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || ||||| ||||| || ||||||||||| | | || | |||| Sbjct 9434 AGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 9493 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | |||||||||||| Sbjct 9494 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCC 9553 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | | | | ||||||| |||||| |||| ||||||| | Sbjct 9554 TGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTC 9613 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 ||||| || | ||||| || || || |||||||| Sbjct 9614 TTGCCAGTAAGAGTTTTCACGAAGATCTGCATTTT 9648 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | | || | |||| Sbjct 8978 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 9037 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | |||||| ||||| Sbjct 9038 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCT 9097 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | | | | ||||||| |||||| ||| | ||||||| | Sbjct 9098 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 9157 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||||| || || || || || ||||| Sbjct 9158 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 9189 >seq1210 Length=99891981 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 18118 CCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCA 18177 ||| ||| || |||||||||| || |||||| |||| | | || | | ||| |||| Sbjct 82995116 CCAGGTGCAGGTTTGATTCTTTCTGGATGTTGCAGTCTGAGAGAGTGTGGCCATCCTCCA 82995057 Query 18178 ATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAA 18237 |||||||||||| | || || | ||| || || | || | ||| ||||| | || Sbjct 82995056 GCTGTTTGCCCGCAAATATCAGACGTTGCTGGTCAAGTGGAATGCCCTCCTTGTGTTGAA 82994997 Query 18238 TTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGC 18297 ||| |||||| | || ||||||| ||||| | || | ||||||| | |||| Sbjct 82994996 TTTCAGCCTTGACATTCTCACTGGTGTCACTGGGCTTGACCTCGAGGGTGATGGTCTTGC 82994937 Query 18298 CGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || | || || ||||| || ||||| Sbjct 82994936 CTGTGAGGGTCTTCACAAAGATCTGCAT 82994909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379263167009580