Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq254 138 1e-27 seq1503 123 2e-23 >seq254 Length=152096393 Score = 138 bits (152), Expect = 1e-27 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||||||||||| ||| || |||| ||||| || |||||||||||||||||||| || | Sbjct 60593023 TCAGGCCCGTGATGTGTGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAG 60592964 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || ||||||||||| | || |||||||||||||||||||||||||| | Sbjct 60592963 GCACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCA 60592904 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 |||| || ||||| || | | || || ||||| || |||||| Sbjct 60592903 CCACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCATC 60592860 >seq1503 Length=86207423 Score = 123 bits (136), Expect = 2e-23 Identities = 196/281 (70%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || | |||| || ||||| || ||||| || || ||||| | | Sbjct 27530809 TTTAAGGCATCATCCAAACTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGT 27530750 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 |||||||| | || | ||||||||| | | | | ||| || ||||| ||||||||||| Sbjct 27530749 TCTCTGCTGAGAACTAAATTAATTCTATCCTCTAAAGGTCGATTCTTCTCAGGGATGGAG 27530690 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| || | | |||||||| |||| ||||| || |||| | || || | || | Sbjct 27530689 AACCAGGTCTTCCTACCCATAATCACCAGATTCTGTTTACCTTCTACTGAAGAAGTTGTG 27530630 Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202 |||||| |||| |||||| | | ||| || | || |||||| |||| ||||| Sbjct 27530629 GTCATTCTCTGGAAATACCTGAATTCATTCCGGAGCGGCGGCCAGGGCAGGTCCCCGTTC 27530570 Query 3203 TTACCAATTCCTAATTGTTCATCAACTGCAACGATGCAGTT 3243 || || || || | | || || || ||||||||||| Sbjct 27530569 TTGCCGATGCCCATGTTTTGGGACACAGCGACGATGCAGTT 27530529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427684846816320