Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq334 109 5e-19 seq1162 102 7e-17 >seq334 Length=143122389 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | ||||||||||| ||||||||| |||| ||||||||| Sbjct 54996876 GGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 54996935 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || || || || || || | || |||||||| ||||| || ||||| ||||| || ||| Sbjct 54996936 CCCCAAGCTGAGAACCAAGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGAAG 54996995 Query 128994 CTCAA 128998 || || Sbjct 54996996 CTGAA 54997000 >seq1162 Length=100215132 Score = 102 bits (112), Expect = 7e-17 Identities = 175/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 5270 TCGGTGTCGTCCAAGCGGTTAACCTCTTGAACTGCTGGGTGCGATATGCGTTCGCATATT 5329 |||||||| |||||| | ||| |||| | | |||| | | || ||||||| || Sbjct 7502444 TCGGTGTCATCCAAGGCTTGAACTTCTTCTATTTCTGGATAAAAAATCTGTTCGCAAATG 7502385 Query 5330 AGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGC 5389 ||||| || || | || || || || || ||||| | || || || |||||||| Sbjct 7502384 AGCTGTGCAATTCGATCACCTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGT 7502325 Query 5390 ACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAG 5449 || || || ||||| |||| || ||||| || || || ||||| || || || |||||| Sbjct 7502324 ACAACACCAACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAG 7502265 Query 5450 TGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACCAGGTGGGAGCTTT 5509 ||||| | || | ||| || |||| || | | ||| || || |||| ||| | | Sbjct 7502264 TGTTTTGCAGCCAAGCCTGACCGTGAAGCCACTCTTCCATAACACCCAGAAAGGAACGCT 7502205 Query 5510 ATCAGAAGGTCAGT 5523 ||| ||| ||| || Sbjct 7502204 ATCTGAATGTCCGT 7502191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447652544150080