Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq683 98.7 1e-15 seq1399 82.4 7e-11 seq1044 82.4 7e-11 >seq683 Length=106955855 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||| | ||||| || | |||||| | || | || | | Sbjct 98906985 ATGCAGATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 98906926 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | |||||| |||||| || || ||||| || ||||| || || Sbjct 98906925 GACACCATCGAGAATGTCAAAGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCAG 98906866 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| || || ||||| || ||||||| | | | | | ||||| ||| Sbjct 98906865 CAGAGGCTGATTTTCGCTGGAAAACAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 98906806 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||| ||||| | || ||||| || | || ||||| || Sbjct 98906805 ATCCAGAAAGAGTCTACCCTGCACCTGGTTCTCCGTCTCAGAGGTGG 98906759 Score = 93.3 bits (102), Expect = 4e-14 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 26753 TTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCAT 26812 ||||| || | |||| |||| | ||||| || || | ||||| || | |||||| | Sbjct 98907227 TTTTTTGTTAGACAA--TGCAGATCTTTGTGAAGACTCTGACTGGTAAGACAATCACCCT 98907170 Query 26813 CGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 26872 ||| | || | | |||||||||||| | ||||| |||||| ||||| ||||| Sbjct 98907169 CGAGGTGGAGCCCAGTGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGG 98907110 Query 26873 GATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA 26932 || ||||| || || || || || || | | || ||||| || ||||||| | | | Sbjct 98907109 CATCCCTCCTGACCAGCAGAGGCTGATCTTTGCTGGGAAACAGCTAGAAGATGGTCGCAC 98907050 Query 26933 CGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGG 26992 | | ||||| ||||| || ||||| || || | || ||||| || | || ||||| Sbjct 98907049 CCTGTCTGACTACAACATCCAGAAAGAGTCCACCCTGCACCTGGTTCTCCGTCTCAGAGG 98906990 Query 26993 AGG 26995 || Sbjct 98906989 TGG 98906987 >seq1399 Length=81552678 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||||| | || || ||||| | ||||| || | |||||| | || | || | Sbjct 65743821 AAAATGCAGATCTTCGTGAAAACTCTTACTGGCAAGACCATCACCCTTGAGGTGGAGCCC 65743880 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | ||||||||||| | || || ||||| || || ||||| || || ||||| Sbjct 65743881 AGTGACACCATCGAAAATGTGAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCCGAC 65743940 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || || ||||| | | ||||| || || ||||||| | | | ||||| Sbjct 65743941 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 65744000 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || ||||| || || | |||||||||||| | || ||||| || Sbjct 65744001 AACATCCAGAAAGAGTCAACCCTGCATCTGGTCCTGCGTCTGAGAGGTGG 65744050 >seq1044 Length=11392 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||||| | || || ||||| | ||||| || | |||||| | || | || | Sbjct 9648 AAAATGCAGATCTTCGTGAAAACTCTTACTGGCAAGACCATCACCCTTGAGGTGGAGCCC 9589 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | ||||||||||| | || || ||||| || || ||||| || || ||||| Sbjct 9588 AGTGACACCATCGAAAATGTGAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCCGAC 9529 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || || ||||| | | ||||| || || ||||||| | | | ||||| Sbjct 9528 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 9469 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || ||||| || || | |||||||||||| | || ||||| || Sbjct 9468 AACATCCAGAAAGAGTCAACCCTGCATCTGGTCCTGCGTCTGAGAGGTGG 9419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478557788332480