Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq683 104 2e-17 >seq683 Length=106955855 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||| | ||||| || | || ||| | || |||||| ||| Sbjct 98906985 ATGCAGATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 98906926 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | |||||| |||||| || || |||||||| ||||| || || Sbjct 98906925 GACACCATCGAGAATGTCAAAGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCAG 98906866 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||||| || || || || || ||||||| | | | | || || ||| Sbjct 98906865 CAGAGGCTGATTTTCGCTGGAAAACAGCTGGAAGATGGTCGTACCCTGTCTGACTACAAC 98906806 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| ||||| Sbjct 98906805 ATCCAGAAAGAGTCTAC 98906789 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| |||| |||||| ||| Sbjct 98906073 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 98906014 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | |||||| |||||| || || |||||||| ||||| || || Sbjct 98906013 GACACCATCGAGAACGTCAAAGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCAG 98905954 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||||| |||| | | ||| ||||| || ||||||| Sbjct 98905953 CAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGATG 98905917 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || | ||||| || | || ||| |||| || ||| ||| Sbjct 98907214 AATGCAGATCTTTGTGAAGACTCTGACTGGTAAGACAATCACCCTCGAGGTGGAGCCCAG 98907155 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | ||||| |||||| ||||| |||||||| ||||| || || Sbjct 98907154 TGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 98907095 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||||| ||||| | | || || || || ||||||| Sbjct 98907094 GCAGAGGCTGATCTTTGCTGGGAAACAGCTAGAAGATG 98907057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429844386550020