Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq91 102 7e-17 seq1 86.0 5e-12 >seq91 Length=163208435 Score = 102 bits (112), Expect = 7e-17 Identities = 149/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050 ||| || ||||| || ||||| ||||| | || | ||| ||||||| | || || | Sbjct 66929731 ACGCAAACATGCAGATCTTTGTGAAGACCCTCACAGCCAAAACCATCACCCTTGAGGTCG 66929672 Query 25051 AGTCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTC 25107 || | |||||| || ||| | || |||| |||| ||| ||||| || || || | Sbjct 66929671 AGCCCAGTGACACCATTGAG--AATGTCAAAGCCAAAATTCAA-GACAAGGAGGGTATCC 66929615 Query 25108 CACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGG 25167 |||||||||| ||||| | || |||||||||||||| | || |||| |||||| | Sbjct 66929614 CACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCT 66929555 Query 25168 GCGATTACAATATTCAAAAAGAATCCAC 25195 || ||||| || || ||||| ||||| Sbjct 66929554 CAGACTACAACATCCAGAAAGAGTCCAC 66929527 >seq1 Length=122973662 Score = 86.0 bits (94), Expect = 5e-12 Identities = 163/236 (69%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | || || ||| | | Sbjct 23278789 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 23278848 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | || || |||| ||| ||||| || || || ||||||||||| Sbjct 23278849 GACACCATTGAGAATGTCAATGCCAAAATTCAA-GACAAGGAGGGTATCCCACCTGACCA 23278907 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||| |||||||| | || |||| |||||| | || ||||| Sbjct 23278908 GCAGCGTCTGATATTTGCTGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAA 23278967 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATT 25233 || || ||| | |||| | || | ||||| | || |||| || |||||| Sbjct 23278968 CATCCAGAAACAGCCCACCCCGCACCTGGTGCTGCGCCTGTGAGGTGG-CATTATT 23279022 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||| || || || ||||||| | || || ||| | | Sbjct 90237478 ATGCAGATCTTTGTGAAGACTTTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 90237537 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || | || |||| |||| ||| ||||| || || || ||||||||| Sbjct 90237538 GACACTATTTAG--AATGTCAAAGCCAAAATTCAG-GACAAGGAGGGTATCCCACCTGAC 90237594 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || ||||| || |||| | || |||| | |||| || ||| Sbjct 90237595 CAGCAGCGTCTGATATTTGCTGGGGAACAGCTGGAGGATGGCCACACTCAGG----CTAC 90237650 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || ||||| |||| ||| | | ||||| Sbjct 90237651 AACATCCAGAAAGAGTCCAACCTAAACCTGGTGCT 90237685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433235663761460