Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1685 266 4e-66 seq1724 251 8e-62 seq1399 105 7e-18 >seq1685 Length=141252148 Score = 266 bits (294), Expect = 4e-66 Identities = 536/789 (68%), Gaps = 6/789 (1%) Strand=Plus/Minus Query 92919 ATAA-TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977 |||| ||| || || ||||| || ||||| || ||| | | |||||||| || | Sbjct 47457121 ATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATG 47457062 Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037 || ||||| | || ||||| | ||| || | || || ||| || | | | Sbjct 47457061 AGCTTCACAGGCAAGGCCTCGGTGAGGAATTCCTGTTCTATCTGAACAGCATTGATAATT 47457002 Query 93038 ATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCA 93097 |||||| | ||||| | | | |||| ||||| | | ||| |||| ||||| ||| Sbjct 47457001 ATTTCTCTCACTCTCTCCTCCGATAGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCA 47456942 Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATA-TCAACTCATTGCTGAATGTTAAACCTGG 93156 || || || ||||||| || |||| || || | || |||||| || || | || || Sbjct 47456941 AAATCAGT--GTAAACCCTCATCTC-TGCTAATAAATTCATTGGAAAACGTGAGGCCAGG 47456885 Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACC 93216 | ||||||||||||||||||||| ||||| || |||||| || ||||| || || || Sbjct 47456884 CATCAGTCCTCGTTTCTTGAGCCACAATATCGATGCAAAAGAACTGGAAAAGAAGATGCC 47456825 Query 93217 TTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCA 93276 ||| || || || || || |||| |||||| || | | || || | ||||| Sbjct 47456824 TTCTACTGCAGCGAAGGCTACAACACGTTCACCATAGGTGGCCTCTTTGTCCCCAATCCA 47456765 Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336 || |||||||| || || ||||| | |||||| | ||||| || || || || || Sbjct 47456764 GCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAG 47456705 Query 93337 GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGA 93396 | || | || | |||| ||||| || || || | ||| |||||||||||| Sbjct 47456704 AAATTCCCTTTCTTTGAGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGA 47456645 Query 93397 ATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCAC 93456 ||| | || ||||| ||||||||||| || |||||||| | ||||| || ||||| || Sbjct 47456644 ATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAAC 47456585 Query 93457 TTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516 | ||| ||||| ||| || | ||||||||| ||||| |||||| ||||||||| || Sbjct 47456584 TATTTGGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCGCTTGCTGCAAAGAA 47456525 Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAG 93576 | ||| | ||| |||||||| | |||| | || || ||||| | | | Sbjct 47456524 AACCAGAACATGGGATATAAAATATCTCTCCCCGGGCTTCAGGGATTCCCAGT-GCCAAT 47456466 Query 93577 ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACAT 93636 || || || || || || || ||| ||||| || || || || || || || ||||| Sbjct 47456465 GTCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACAT 47456406 Query 93637 ATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAG 93696 | ||| || | || || | || ||||| |||||||| || ||||| || | || Sbjct 47456405 CTGCCAGATACCATGGTACTCGATGGGAAAGATGACAAAGCGGCAGGGGTTTCCTCTCAG 47456346 Query 93697 TAACGGCTC 93705 | |||||| Sbjct 47456345 CAGCGGCTC 47456337 Score = 129 bits (142), Expect = 7e-25 Identities = 336/510 (66%), Gaps = 3/510 (1%) Strand=Plus/Minus Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202 ||||| | || || | ||||||| ||||||||||||| ||||| | |||||| |||| Sbjct 130531185 AATGTGAGGCCAGGCATCAGTCCTTGTTTCTTGAGCCAGAATATCAATGCAAAAGAACCA 130531126 Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA 93262 ||||| || | | |||||| ||||| || ||| |||||| || | || Sbjct 130531125 GAAAAGAAGGTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACGTCT 130531066 Query 93263 TTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCG 93322 || | | ||||| || ||||| | || || ||||| | ||| || | ||||| Sbjct 130531065 TTGTTCCCAATCCAACACAAGACCCAACCTGCCTTCTTCTTGACACA-GGCATCGTTTCA 130531007 Query 93323 ATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382 | || || || | | || | || | |||| || ||| || || | ||| Sbjct 130531006 ACGGCATTGAAGATAAATTCCCTTTCTTTGTTATCTTTAAT--ATGCGTCAATAAGGAGA 130530949 Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCT 93442 || || |||||||| | || || || ||||||||||| || ||||| || | | Sbjct 130530948 CTATTTATGTCAGAATGTATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGAAGGTT 130530889 Query 93443 TCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCG 93502 || || ||||| ||||||||| |||| || || | ||||||| | ||| ||||| Sbjct 130530888 TCTGTAATCTGAACTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTATTATCCCATCA 130530829 Query 93503 GATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTA 93562 |||||||||| ||||||| ||||| |||||||| | | | ||| || || Sbjct 130530828 CATGCTGCAAAGAAAGCCAGAATATGGGATATAAAATATCTTTACTCAGGCTTCAGGGCT 130530769 Query 93563 TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCT 93622 ||||| | | | || || || || || || || | | | |||| || || | ||| Sbjct 130530768 TCCCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAGACCTCT 130530709 Query 93623 GCTTTTTTGTACATATCCCATATGTCTTGA 93652 |||| || ||||| | ||| || || ||| Sbjct 130530708 ACTTTCTTATACATTTTCCAAATATCATGA 130530679 >seq1724 Length=455154 Score = 251 bits (278), Expect = 8e-62 Identities = 430/617 (70%), Gaps = 5/617 (1%) Strand=Plus/Plus Query 93061 TGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTC 93120 |||||| || || | || ||| |||| ||||| ||||| || |||||||| || || Sbjct 265676 TGGTTTGTGCACCAGGTATTTGAACATCAAGCA-GCAAAATCACAGTGTAAACCCTCATC 265734 Query 93121 TCGTGATATCAACT-CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCC 93179 || || || || | |||| || || | || || | |||||||||||||||||||| Sbjct 265735 TC-TGCTAATAAGTTCATTCGAAAACGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCC 265793 Query 93180 AAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAA 93239 | ||||| || |||||| ||| ||||| || || ||||| || || ||||| || |||| Sbjct 265794 ACAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCTACTGCAGCAAAGGCTACAA 265853 Query 93240 TACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTT 93299 |||||| || | | || || | ||||| || || ||||| || || | Sbjct 265854 CACGTTCACCATAGATAGCCTCTTTGTCCCCAATCCAGCACAAGGCTCAATCTGCGTTCT 265913 Query 93300 TCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTC 93359 |||| | ||||| | |||||||| || ||||| || | || | || | | |||| Sbjct 265914 TCTTGACGCAAGGCATCGTTTCGATGGCATTAAAGAGAAATTCCCTTTCTTTGGCATCTT 265973 Query 93360 GTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTT 93419 ||||| || || || | ||| ||||||||||||||| | || ||||| ||||||| Sbjct 265974 TGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTT 266033 Query 93420 GGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGA 93479 |||| | |||||||| | ||||| || ||||| ||| ||| ||||| ||| || | Sbjct 266034 GGAAGACATAGAAACAGCAGGCTTCTGTAATCTGAACTATTTGGCTAAATCGCTCCACCA 266093 Query 93480 GATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAAT 93539 ||||||||| ||||| ||||| ||||||||| ||| ||| | | | |||||||| Sbjct 266094 AATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCAGAAGACGGGATATAAAAT 266153 Query 93540 GTTTCTCATCATCTTTAAGCTTATCCCAAT-CGGATAGATCTTTTGAAAGATCGACTTCT 93598 | |||| || || || ||||| | | || | || || || || || || || Sbjct 266154 ATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCTGA-ATGTCCTTGGACAGGTCCACCTCC 266212 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGA 93658 ||| ||||| || || || ||||| ||||| ||||| | ||| || || || || | Sbjct 266213 TCGGTGGTCCAGAAGGAAGCCTCTGCCTTTTTATACATCTGCCAGATATCATGGTACTCG 266272 Query 93659 ATTGGAAATATGACAAA 93675 || || || | |||||| Sbjct 266273 ATGGGGAAGACGACAAA 266289 >seq1399 Length=81552678 Score = 105 bits (116), Expect = 7e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| ||||| | || || | ||||||||||||||||||||| ||||| || ||| Sbjct 9735758 TCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 9735699 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||||||||| || || |||||||| || ||||| || |||| |||||| Sbjct 9735698 AAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACAACACGTTC 9735646 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 |||| |||||| || || || | ||| ||||||||||||||| | || ||||| || Sbjct 9733358 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9733299 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 ||||||||| || |||||||| | ||||| || ||||| |||||||| ||||| ||| Sbjct 9733298 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9733239 Query 93475 TAC 93477 || Sbjct 9733238 CAC 9733236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556739098072160