Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq91 159 3e-34 seq1 140 3e-28 seq254 127 2e-24 seq1611 116 3e-21 seq683 116 3e-21 seq1553 104 2e-17 seq1162 93.3 4e-14 >seq91 Length=163208435 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||| || || | || | ||||| |||| ||||| || || | Sbjct 66929727 AAACATGCAGATCTTTGTGAAGACCCTCACAGCCAAAACCATCACCCTTGAGGTCGAGCC 66929668 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || || ||||| ||||||||||||||||||||||| ||||| || Sbjct 66929667 CAGTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGA 66929608 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || ||||| |||||||||||||||||| | |||||| |||||| |||| || || Sbjct 66929607 CCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTA 66929548 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| || ||||| |||||| || | || ||||| |||| || || Sbjct 66929547 CAACATCCAGAAAGAGTCCACCCGGCACCTGGTGTTGCGCCTGCGAGGTGG 66929497 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 75222534 AGATGTGGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGCCCA 75222593 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 ||| || || || ||||| ||||||||||||||| |||| || | ||| || | Sbjct 75222594 GTGATGCCACTGAGAATGTCAAAGCCAAAATTCAAGACAAGTAGGGCATCCTACCTGACC 75222653 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || |||| ||||||| ||||||||| | ||||| || ||| ||| || |||| Sbjct 75222654 AGCAGTGTCTGATATTTGAGGGCAAACAGCTGAAGGATGGCCACACACTCTTAGACTACA 75222713 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || ||||| |||||| Sbjct 75222714 ACATCCAGAAAGAGTCCACC 75222733 >seq1 Length=122973662 Score = 140 bits (154), Expect = 3e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 23278787 AGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCA 23278846 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| | || || |||| ||||||||||||||||||||||| ||||| || | Sbjct 23278847 GTGACACCATTGAGAATGTCAATGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACC 23278906 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| |||||||| ||||||||| | |||||| |||||| |||| || |||| Sbjct 23278907 AGCAGCGTCTGATATTTGCTGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACA 23278966 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || ||| | ||||| Sbjct 23278967 ACATCCAGAAACAGCCCACC 23278986 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || ||||| || || || || |||| ||||| || || ||| Sbjct 90237476 AGATGCAGATCTTTGTGAAGACTTTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCA 90237535 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || || | | || ||||| |||||||| |||||||||||||| ||||| || | Sbjct 90237536 GTGACACTATTTAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGTATCCCACCTGACC 90237595 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| |||||||| || ||||| | |||||| || || ||| | |||| Sbjct 90237596 AGCAGCGTCTGATATTTGCTGGGGAACAGCTGGAGGATGGCCACA----CTCAGGCTACA 90237651 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||| || ||||| |||| | || | | || |||| |||| || || Sbjct 90237652 ACATCCAGAAAGAGTCCAACCTAAACCTGGTGCTGCGCCTGCGAGGTGG 90237700 >seq254 Length=152096393 Score = 127 bits (140), Expect = 2e-24 Identities = 149/200 (75%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || |||| || || | || || || || |||||||||| || || | | Sbjct 125219913 AGATGCAGATCGTTGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGCCAA 125219854 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| | || || ||||| ||||||||||||||||||| ||| ||||| || | Sbjct 125219853 GTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGG-TATCCCACCTGACC 125219795 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | ||| ||| |||||||||||||| | |||||| ||| || |||| || |||| Sbjct 125219794 AGCAGCATCTGATACTTGCCGGCAAACAGCTGGAGGATGGCCGAACTCTCTCAGACTACA 125219735 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| | ||||| |||||| Sbjct 125219734 ACATCCGGAAAGAGTCCACC 125219715 >seq1611 Length=34552619 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | | || ||||| |||| ||| || || ||| Sbjct 276966 ATGCAGATCTTTGTGAAGACCCTCATGGGCAAAACCATCACCACTGAGGTCGAGCCCAGT 276907 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | || || ||| | ||||||||||||||||||||| | ||||| || || Sbjct 276906 GACATCACTGAGAATGTCACAGCCAAAATTCAAGACAAGGAGGGTGTCCCACCTGACCAG 276847 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||| |||||||||||||||||| | ||||| |||||| |||| || ||||| Sbjct 276846 CAGCATCTGATATTTGCCGGCAAACAGCTGGAGGACGGCCGCACTCTCTCAGACTACAAT 276787 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || ||||| |||||| | || | || |||| |||| || || Sbjct 276786 ATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCACCTGCGAGGTGG 276740 >seq683 Length=106955855 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || ||| ||||| ||||| ||| Sbjct 89490662 AGATGCAGATCTTTGTGAACACCCTCACGGGCAAGACCAACACCCTTGAGGTGGAGCCCA 89490603 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| | || || ||||| ||||| |||||||||||||| || | || || | Sbjct 89490602 GTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCTGCCTGACC 89490543 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || |||| ||||||| ||||||||| | |||||| ||||| |||| || || | Sbjct 89490542 AGCAGTGTCTGATATTTGTGGGCAAACAGCTGGAGGATGGCCGCAGTCTCTCAGACTAGA 89490483 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 | || || ||||| |||||| | || | || |||| |||| || || Sbjct 89490482 ATATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGTCTGCGAGGTGG 89490434 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | || ||||| || |||| || || ||||| ||| Sbjct 98907213 ATGCAGATCTTTGTGAAGACTCTGACTGGTAAGACAATCACCCTCGAGGTGGAGCCCAGT 98907154 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || ||||||||||| || || || || || || Sbjct 98907153 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 98907094 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || |||||| |||| ||| |||||| | || || |||||| Sbjct 98907093 CAGAGGCTGATCTTTGCTGGGAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 98907034 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| |||||| Sbjct 98907033 ATCCAGAAAGAGTCCACC 98907016 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || || || ||| Sbjct 98906302 GATGCAGATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 98906243 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || || |||| ||| || ||||||||||| || || || || || || Sbjct 98906242 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 98906183 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || |||||| | || ||| |||||| | || || ||||| Sbjct 98906182 GCAGAGGCTGATCTTTGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 98906123 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || ||||| |||||| Sbjct 98906122 CATCCAGAAAGAGTCCACC 98906104 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || || || ||| Sbjct 98906530 GATGCAGATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 98906471 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || || |||| ||| || ||||||||||| || || || || || || Sbjct 98906470 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 98906411 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || |||||| | || ||| |||||| | || || ||||| Sbjct 98906410 GCAGAGGCTGATCTTTGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 98906351 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || ||||| |||||| Sbjct 98906350 CATCCAGAAAGAGTCCACC 98906332 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || ||||| || | || || || ||||| ||| Sbjct 98906758 GATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATTACCCTCGAGGTGGAGCCCAG 98906699 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || || |||| ||| || ||||||||||| || || || || || || Sbjct 98906698 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 98906639 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || |||||| | || ||| |||||| | || || ||||| Sbjct 98906638 GCAGAGGCTGATCTTTGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 98906579 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || ||||| || ||| Sbjct 98906578 CATCCAGAAAGAGTCTACC 98906560 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 ||||| ||||| || || || ||||| |||||||||||||||||| | |||||| |||| Sbjct 56040516 GGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGC 56040457 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAG 22408 || |||| || |||||||| || |||| Sbjct 56040456 ACTCTCTCAGACTACAACATCCAGAAAG 56040429 >seq1553 Length=133034539 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || | ||| || || |||| || ||||| |||| ||||| || | | | Sbjct 42872067 AGATGCAGATCTCTGTAAAGACCCTAACAGGCAAAACCATCACCCTTGAGGTCCAGCCGA 42872008 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| || || ||||| || || || ||||||||||| || ||||| || | Sbjct 42872007 GTGACACCAGTGAAAATGTCAAAGCCAAGATCCACGACAAGGAGGGCATCCCACCTGACC 42871948 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | ||| ||||||| ||||||||| |||||| |||||| | || || || | Sbjct 42871947 AGCAGCATCTGATATTTGTGAACAAACAGTTGGAGGATGGCCGCACTCTTTCAGACTATA 42871888 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || ||||| |||||| Sbjct 42871887 ACATCCAGAAAGAGTCCACC 42871868 >seq1162 Length=100215132 Score = 93.3 bits (102), Expect = 4e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 |||||||| ||||||||||| || ||||| || || || |||| ||| |||| |||||| Sbjct 78152846 AAAATTCAGGACAAGGAGGGCATCCCACCTGACCAGCAGTGTCTGATACTTGCGGGCAAA 78152905 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | |||||| ||||| |||| | |||||||| | ||||| |||||| Sbjct 78152906 CAGCTGGAGGATGGCCGCAGTCTCTCAGCCTACAACATCCGGAAAGAGTCCACC 78152959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419638561734460