Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq334 107 2e-18 >seq334 Length=143122389 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||||| || ||||| ||| |||| || |||||||| || ||||||||||| || | Sbjct 54996874 AGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGA 54996933 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 |||| || ||||| ||||| ||||| || ||| || ||||| || || |||| || | Sbjct 54996934 TGCCCCAAGCTGAGAACCAAGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGA 54996993 Query 9981 ATCTAAAGACCCTACGGCT 9999 | || ||| |||| |||| Sbjct 54996994 AGCTGAAGGCCCTCAGGCT 54997012 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || || ||||| || ||||||||||||||||| ||||| || || || ||||||| Sbjct 54999203 AGCTCCAAGAGAAAGGCATCTACAAAGCCATGAGTGAGTTTGATATCTTCATCAACTACA 54999262 Query 10140 TAGAAGCATACATGACAATTAA 10161 ||||||| ||||||||||| || Sbjct 54999263 TAGAAGCCTACATGACAATGAA 54999284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552596003743360