Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq683 122 8e-23 seq91 100 3e-16 seq1399 95.1 1e-14 seq1044 95.1 1e-14 seq565 95.1 1e-14 seq944 86.0 6e-12 seq1 86.0 6e-12 >seq683 Length=106955855 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || ||||| || || |||||| ||| ||||||||||| ||| Sbjct 98907017 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGTTTCCCA 98907076 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| | |||||| || ||||| ||||| |||||||| ||| || |||| Sbjct 98907077 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTG 98907136 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || |||| ||| | || || || |||||||| Sbjct 98907137 ACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATTGTCTTACCAGTCAGAGTC 98907196 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 98907197 TTCACAAAGATCTGCAT 98907213 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||||||||| || || ||||| || || |||||| ||| || |||||||| ||| Sbjct 98906561 GTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGTTTCCCA 98906620 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| | |||||| || ||||| ||||| |||||||| ||| || |||| Sbjct 98906621 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTG 98906680 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| || |||| ||| | || || || ||||| || Sbjct 98906681 ACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTAATGGTCTTACCAGTCAGGGTC 98906740 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 98906741 TTCACGAAGATCTGCAT 98906757 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||||||||| || || ||||| || || || ||| ||| || |||||||||||| Sbjct 98906789 GTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCTTCCAGCTGTTTTCCA 98906848 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 ||| | |||| | |||||| || ||||| ||||| ||||| || ||| || ||| || Sbjct 98906849 GCGAAAATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCTTGGATCTT-TGCTTT 98906907 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 || | |||| |||||| | |||||| || | ||| | || ||||| || || || Sbjct 98906908 GACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGTGT 98906967 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 98906968 CTTCACGAAGATCTGCAT 98906985 >seq91 Length=163208435 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||||| || || |||||||| || || ||||| || Sbjct 66929497 CCACCTCGCAGGCGCAACACCAGGTGCCGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 66929556 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || |||||||| || || | |||| |||||||| || || || Sbjct 66929557 AGAGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 66929616 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||| | ||| ||| || |||| | || | |||||| | |||||| Sbjct 66929617 ATACCCTCCTTGT-CTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGAC 66929675 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | |||||| | || || || || ||||| ||||||||| Sbjct 66929676 CTCAAGGGTGATGGTTTTGGCTGTGAGGGTCTTCACAAAGATCTGCATG 66929724 >seq1399 Length=81552678 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| |||| || ||||| || || || ||||| || | ||||| | Sbjct 65744266 CGCAGGACCAGGTGTAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 65744207 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | | |||||| |||||||| ||||| || || Sbjct 65744206 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTA 65744147 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | ||||| |||||| | ||| ||||| | ||| | Sbjct 65744146 TCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 65744087 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| || || || || |||||||| Sbjct 65744086 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 65744052 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| | | || |||||| ||||| | ||||||||||||||||||||||| | Sbjct 71370966 GCACCACCACACAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCA 71371025 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || || ||| || || || || ||||| ||||| || |||||||| ||| Sbjct 71371026 GACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGA 71371085 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | || |||| || Sbjct 71371086 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGATTCA 71371145 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| ||| | || || || | || ||||| || ||||||||||| Sbjct 71371146 GCCTCGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACGAAAATCTGCAT 71371195 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | || |||||||| || || ||||| || | ||||| | Sbjct 65744494 CGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 65744435 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | | |||||| ||||| || ||||| || || Sbjct 65744434 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTA 65744375 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || ||| | | ||||| |||||| | ||| ||||| | ||| | Sbjct 65744374 TCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 65744315 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| || || || || |||||||| Sbjct 65744314 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 65744280 >seq1044 Length=11392 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| |||| || ||||| || || || ||||| || | ||||| | Sbjct 9203 CGCAGGACCAGGTGTAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 9262 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | | |||||| |||||||| ||||| || || Sbjct 9263 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTA 9322 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | ||||| |||||| | ||| ||||| | ||| | Sbjct 9323 TCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 9382 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| || || || || |||||||| Sbjct 9383 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 9417 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | || |||||||| || || ||||| || | ||||| | Sbjct 8975 CGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 9034 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | | |||||| ||||| || ||||| || || Sbjct 9035 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTA 9094 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || ||| | | ||||| |||||| | ||| ||||| | ||| | Sbjct 9095 TCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 9154 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| || || || || |||||||| Sbjct 9155 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 9189 >seq565 Length=117381234 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | ||||||| ||||||||||||| || Sbjct 50944601 GCACCACCACGAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGAATATTGTGGTCA 50944542 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || || ||| || ||||| || ||||| ||||| || |||||||| ||| Sbjct 50944541 GACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAGGATCAGTCTTTGCTGATCAGGA 50944482 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| || |||| || Sbjct 50944481 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTGTCGTATCCGAGGGTTCA 50944422 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||| | || || || || || ||||| || ||||||||||| Sbjct 50944421 ACCTCGAGGGTGATAGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 50944372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | ||||||| |||||||||||||| | Sbjct 72458852 GCACCACCACGAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGAATATTGTAGTTA 72458793 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || || ||| || ||||| || ||||| |||||| || |||||||| ||| Sbjct 72458792 GACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 72458733 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | | |||| || Sbjct 72458732 GGAATTCCTTCCTTATCCCGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCA 72458673 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| ||| | || || || || || ||||| || ||||||||||| Sbjct 72458672 TCCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 72458623 >seq944 Length=110113093 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/231 (68%), Gaps = 13/231 (6%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | ||||||| |||||||| ||||| || Sbjct 27807549 GCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTGCTTTTGAATGTTGTAGTC- 27807607 Query 126944 CCCATCGTGCGAGA-ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002 ||| ||| || || || || ||||| |||| || |||||||| || Sbjct 27807608 -----------AGACATCTTCCAGTTGCTTGCCAGCAAAGATTGGTCTTTGCTGATCAGG 27807656 Query 127003 AGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTC 127062 ||| || || ||||| ||| ||| || ||| | | ||| || |||| || Sbjct 27807657 AGGAATTCCTTCCTTATCCTGGATCTTGGTCTTTACATTTTCTGTCGTATCCGAGGGTTC 27807716 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||| | ||||| || || |||||||| |||||||||||||| Sbjct 27807717 AACCTCGAGGGTGATGGTTTTCCCTGTAAGAGTTTTCACAAAAATCTGCAT 27807767 >seq1 Length=122973662 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| ||||| || || | || ||| || || ||||| || | ||||| | Sbjct 23279003 CGCAGCACCAGGTGCGGGGTGGGCTGTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCA 23278944 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||||||| ||||| | |||| |||||||| || || || || ||||||||| Sbjct 23278943 TCCTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTG 23278884 Query 127019 TCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 | | ||| ||| || |||| | || | |||||| | |||||| || | ||| | Sbjct 23278883 T-CTTGAATTTTGGCATTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGAT 23278825 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || || || || ||||| |||||||| Sbjct 23278824 GGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 23278789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475396879300160