Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq1162 111 4e-20 >seq1162 Length=100215132 Score = 111 bits (122), Expect = 4e-20 Identities = 183/263 (70%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||| |||||||| ||| | ||| | |||| || || || || || | |||||||| Sbjct 7502217 TGGGTGTTATGGAAGAGTGGCTTCACGGTCAGGCTTGGCTGCAAAACACTTTATTGATGT 7502276 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 || |||||||| || ||| ||| | ||| || || ||||||||||| | |||||||| Sbjct 7502277 AGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTT 7502336 Query 1085 TAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTTGTGA 1141 | || || ||| ||| | | || ||||||| | ||||| ||| | ||||| || Sbjct 7502337 TGGCAAAGAAAAG---TTTGAAGTCAAAAAAGGTGATCGAATTGCACAGCTCATTTGCGA 7502393 Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGATTCCTTAGAGGATTCGGAAAGGGGTTC 1201 | || | ||| |||| || || ||| | |||| || || | ||||||||||| Sbjct 7502394 ACAGATTTTTTATCCAGAAATAGAAGAAGTTCAAGCCTTGGATGACACCGAAAGGGGTTC 7502453 Query 1202 TGCAGGATTTGGGTCTACCGGAA 1224 | ||| ||||| || || |||| Sbjct 7502454 AGGAGGTTTTGGTTCCACTGGAA 7502476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138652806579504