Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1399 125 6e-24 seq1044 125 6e-24 seq91 114 1e-20 seq254 102 6e-17 seq1 98.7 8e-16 seq1611 86.0 5e-12 >seq1399 Length=81552678 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | || | ||| ||||| || ||||| || || ||||| || | Sbjct 65744050 CCACCTCTCAGACGCAGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAA 65743991 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| |||| ||||| |||||||| || | | ||| || ||||| ||| Sbjct 65743990 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 65743931 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| ||||| || || || || ||| |||| | |||||| | ||||| Sbjct 65743930 ATGCCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 65743871 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| || ||||| || | |||||| || || |||||||| Sbjct 65743870 TCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATCTGCAT 65743824 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | | ||| | | |||| |||| ||| Sbjct 65744482 TGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 65744423 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| || ||||| || ||||||||||||||||| || || Sbjct 65744422 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATCTTG 65744363 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | |||||| | |||||||| || |||| || |||||||| Sbjct 65744362 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTC 65744303 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 65744302 AGGGTCTTCACGAAGATCTGCAT 65744280 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | || | || ||||| || || || || || ||||| || | Sbjct 65744278 CCACCTCTCAGACGCAGGACCAGGTGTAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 65744219 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| |||| ||||| |||||||| || | | ||| || ||||| || Sbjct 65744218 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 65744159 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||||||||| || || || || ||| |||| | |||||| | |||||| Sbjct 65744158 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 65744099 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || |||||||| | || || || || |||||||| Sbjct 65744098 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 65744052 >seq1044 Length=11392 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | || | ||| ||||| || ||||| || || ||||| || | Sbjct 9419 CCACCTCTCAGACGCAGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAA 9478 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| |||| ||||| |||||||| || | | ||| || ||||| ||| Sbjct 9479 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 9538 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| ||||| || || || || ||| |||| | |||||| | ||||| Sbjct 9539 ATGCCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 9598 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| || ||||| || | |||||| || || |||||||| Sbjct 9599 TCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATCTGCAT 9645 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | | ||| | | |||| |||| ||| Sbjct 8987 TGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 9046 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| || ||||| || ||||||||||||||||| || || Sbjct 9047 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATCTTG 9106 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | |||||| | |||||||| || |||| || |||||||| Sbjct 9107 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTC 9166 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 9167 AGGGTCTTCACGAAGATCTGCAT 9189 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | || | || ||||| || || || || || ||||| || | Sbjct 9191 CCACCTCTCAGACGCAGGACCAGGTGTAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 9250 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| |||| ||||| |||||||| || | | ||| || ||||| || Sbjct 9251 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 9310 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||||||||| || || || || ||| |||| | |||||| | |||||| Sbjct 9311 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 9370 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || |||||||| | || || || || |||||||| Sbjct 9371 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 9417 >seq91 Length=163208435 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 101271 GGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTAC 101330 |||| || ||||| || || ||||| || | || ||| | | |||| |||| || || | Sbjct 66929525 GGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGC 66929584 Query 101331 CTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTT 101390 | |||||||||| |||||| || || || || || || || || ||||||||||| || Sbjct 66929585 CGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTGGCTT 66929644 Query 101391 TTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAG 101450 | ||| | || | |||||| | || || ||||| |||| |||||| | || | | Sbjct 66929645 TGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGGCTGTGAGGG 66929704 Query 101451 TTTTTACAAATATCTGCATGGTTACG 101476 | || ||||| ||||||||| || || Sbjct 66929705 TCTTCACAAAGATCTGCATGTTTGCG 66929730 >seq254 Length=152096393 Score = 102 bits (112), Expect = 6e-17 Identities = 145/203 (71%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| | || ||||| || | || ||||| | |||| |||| || Sbjct 125219710 TGCAGGGTGGACTCTTTCCGGATGTTGTAGTCTGAGAGAGTTCGGCCATCCTCCAGCTGT 125219769 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||| ||||| | |||| || || || || || ||| ||| ||||||||||| Sbjct 125219770 TTGCCGGCAAGTATCAGATGCTGCTGGTCAGGTGGGATACCTCCTTG-TCTTGAATTTTG 125219828 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | |||||| | || || |||||||||| || ||||| || Sbjct 125219829 GCTTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTG 125219888 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || |||| |||||||| Sbjct 125219889 AGGGTCTTCACAACGATCTGCAT 125219911 >seq1 Length=122973662 Score = 98.7 bits (108), Expect = 8e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 101281 TTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATAT 101340 ||| || || ||||| || | || ||| | | |||| |||| || || || |||||||| Sbjct 23278977 TTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAATAT 23278918 Query 101341 CAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTC 101400 || |||||| || || || || || || || || ||||||||||| || ||| | || Sbjct 23278917 CAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTGGCATTGACATTCTC 23278858 Query 101401 TACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 | |||||| | || || ||||| |||| || ||||| || | || || ||||| Sbjct 23278857 AATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAA 23278798 Query 101461 TATCTGCAT 101469 |||||||| Sbjct 23278797 GATCTGCAT 23278789 >seq1611 Length=34552619 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || |||||||| || | || ||| | | | || |||| || Sbjct 276764 TGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGAGAGAGTGCGGCCGTCCTCCAGCTGT 276823 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||||||||| | |||| || || || || | || || || ||||||||||| Sbjct 276824 TTGCCGGCAAATATCAGATGCTGCTGGTCAGGTGGGACACCCTCCTTGTCTTGAATTTTG 276883 Query 101387 TGTTTTACAATTTCTACAG---TGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443 | | ||| |||| ||| ||||| | || || ||| |||| |||||||| Sbjct 276884 GCTGTGACA--TTCT-CAGTGATGTCACTGGGCTCGACCTCAGTGGTGATGGTTTTGCCC 276940 Query 101444 GTTAAAGTTTTTACAAATATCTGCATG 101470 | | || || ||||| ||||||||| Sbjct 276941 ATGAGGGTCTTCACAAAGATCTGCATG 276967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396193958521788