Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1399 123 5e-23 seq944 113 9e-20 seq565 109 1e-18 seq1685 100 6e-16 seq192 100 6e-16 seq683 95.1 2e-14 seq1044 91.5 3e-13 >seq1399 Length=81552678 Score = 123 bits (136), Expect = 5e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | || | || || ||||| | ||||| |||||| ||||| || |||| Sbjct 71370968 ACCACCACACAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGA 71371027 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || || ||| |||| |||| ||| || ||||||||||| ||| || |||||||| || Sbjct 71371028 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGG 71371087 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||| ||||| || || || |||||||| ||| | ||| || ||||| | Sbjct 71371088 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGATTCAGC 71371147 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || ||||| || || | | ||||| | || ||||||||||| Sbjct 71371148 CTCGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACGAAAATCTGCATTTT 71371198 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || | ||| | || | |||||| ||| || || ||| Sbjct 65744053 ATACCACCTCTCAGACGCAGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCA 65743994 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| || || || |||||||| | ||||| || || || Sbjct 65743993 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGG 65743934 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || || ||| || ||||| || | || | || Sbjct 65743933 GGAATGCCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCC 65743874 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || || ||||| || ||||| | ||||| | || ||||||||||| Sbjct 65743873 ACCTCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATCTGCATTTT 65743821 >seq944 Length=110113093 Score = 113 bits (124), Expect = 9e-20 Identities = 164/231 (71%), Gaps = 13/231 (6%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| || |||| || || || || |||| Sbjct 27807551 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTGCTTTTGA-ATGTTGTAGTCAG 27807609 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | |||| |||| ||| || |||||||||||| ||| || |||||||| | Sbjct 27807610 A-----------CATCTTCCAGTTGCTTGCCAGCAAAGATTGGTCTTTGCTGATCAGGAG 27807658 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || | |||||||| | | | ||| || | ||| | Sbjct 27807659 GAATTCCTTCCTTATCCTGGATCTTGGTCTTTACATTTTCTGTCGTATCCGAGGGTTCAA 27807718 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538 | || || || |||||||| || || | ||||| | ||| |||||||||| Sbjct 27807719 CCTCGAGGGTGATGGTTTTCCCTGTAAGAGTTTTCACAAAAATCTGCATTT 27807769 >seq565 Length=117381234 Score = 109 bits (120), Expect = 1e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | | ||| ||| ||| || ||||| || | || Sbjct 72458850 ACCACCACGAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGA-ATATTGTAGTTAG 72458792 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| || || ||||||||||| | ||| || |||||||| | Sbjct 72458791 ACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 72458732 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| | || || |||||||| ||| ||| || | ||| Sbjct 72458731 GAATTCCTTCCTTATCCCGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCAT 72458672 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| | || ||||||||||| Sbjct 72458671 CCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 72458620 Score = 105 bits (116), Expect = 1e-17 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | | ||| ||| ||| || ||||| | |||| Sbjct 50944599 ACCACCACGAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGA-ATATTGTGGTCAG 50944541 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| || || ||||||| ||| | ||| || |||||||| | Sbjct 50944540 ACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAGGATCAGTCTTTGCTGATCAGGAG 50944481 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || || ||||| | | | ||| || | ||| | Sbjct 50944480 GAATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTGTCGTATCCGAGGGTTCAA 50944421 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || || || || || || | ||||| | || ||||||||||| Sbjct 50944420 CCTCGAGGGTGATAGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 50944369 >seq1685 Length=141252148 Score = 100 bits (110), Expect = 6e-16 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| || || ||||||||||| | ||| || ||| |||| || |||||||| | Sbjct 2033638 CATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGATGAGCAGGAGGAATTCCTTCCT 2033579 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 |||| || || || |||||||| ||| | |||||| | ||| || || || || | Sbjct 2033578 TATCCTGGATCTTGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAACCTCAAGGGTGA 2033519 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 |||| || || ||| ||||| | || ||||||||||| Sbjct 2033518 TGGTCTTCCCCCTTAGGGTTTTCACGAAAATCTGCATTTT 2033479 Score = 91.5 bits (100), Expect = 3e-13 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 49818 ATTAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAA 49877 || || || ||||||||||| |||||||||| || || ||||||||||| ||| Sbjct 47456953 ATCAAGCAAGCAAAATCAGT--GTAAACCCTCATCTCTGCTAATAAATTCATTGGAAAAC 47456896 Query 49878 GTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAA 49937 || | || ||||| | ||||| || || ||||| ||||| ||||||||| ||| ||| Sbjct 47456895 GTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCACAATATCGATGCAAAAGAACTGGAA 47456836 Query 49938 AAGAATATACCCTCGAC 49954 ||||| || || || || Sbjct 47456835 AAGAAGATGCCTTCTAC 47456819 >seq192 Length=157873769 Score = 100 bits (110), Expect = 6e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || ||| | || |||| Sbjct 100760685 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATACTGTAGTCAG 100760627 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || | | |||| |||| ||| || ||||||||||| | ||| || | |||||| | Sbjct 100760626 ACAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTTATCAGGAG 100760567 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| ||| ||| || ||| Sbjct 100760566 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGAGTTCAG 100760507 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || ||||| || || || | ||||| | || ||||||||||| Sbjct 100760506 TCTTGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 100760455 >seq683 Length=106955855 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | || | |||| |||||| ||| || || ||| Sbjct 98906528 ATCCCACCTCTGAGACGGAGAACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCA 98906587 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| ||||||||||| | ||||| || ||||| Sbjct 98906588 GACAGGGTGCGACCATCTTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 98906647 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| || | || | || Sbjct 98906648 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 98906707 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || |||||||| |||||||| | || || | || |||||||| Sbjct 98906708 ACCTCGAGGGTAATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 98906757 Score = 87.8 bits (96), Expect = 4e-12 Identities = 165/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | || | || | |||||| ||| || || ||| Sbjct 98906984 ATCCCACCTCTGAGACGGAGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 98907043 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | ||||| ||||||||||| | ||||| || ||||| Sbjct 98907044 GACAGGGTGCGACCATCTTCTAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 98907103 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| || | || | || Sbjct 98907104 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCC 98907163 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGAA 192546 || || || || || || |||||||| | || || | ||| ||||||||| | | | || Sbjct 98907164 ACCTCGAGGGTGATTGTCTTACCAGTCAGAGTCTTCACAAAGATCTGCATTGTCTAACAA 98907223 Query 192547 AAA 192549 ||| Sbjct 98907224 AAA 98907226 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | || | || | |||||| ||| || || ||| Sbjct 98906072 ATCCCACCTCTGAGACGGAGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 98906131 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| ||||||||||| | ||||| || ||||| Sbjct 98906132 GACAGGGTGCGACCATCTTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 98906191 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| || | || | || Sbjct 98906192 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCG 98906251 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||| | ||| || | || |||||||| Sbjct 98906252 ACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 98906301 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | || | || | |||||| ||| || || ||| Sbjct 98906300 ATCCCACCTCTGAGACGGAGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 98906359 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| ||||||||||| | ||||| || ||||| Sbjct 98906360 GACAGGGTGCGACCATCTTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 98906419 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| || | || | || Sbjct 98906420 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCG 98906479 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||| | ||| || | || |||||||| Sbjct 98906480 ACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 98906529 Score = 84.2 bits (92), Expect = 4e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || || || | ||| | |||||| ||| || || ||||| | || ||| |||| ||| Sbjct 98905637 ACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCC 98905696 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | ||||| ||||||||||| | ||||| || ||||| || || ||||| || || || Sbjct 98905697 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGG 98905756 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || || || ||||| || | || | || || || || || |||||||| Sbjct 98905757 ATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTTTTG 98905816 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||| || | || |||||||| Sbjct 98905817 CCAGTGAGTGTCTTCACGAAGATCTGCAT 98905845 >seq1044 Length=11392 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || | ||| | || | |||||| ||| || || ||| Sbjct 9416 ATACCACCTCTCAGACGCAGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCA 9475 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| || || || |||||||| | ||||| || || || Sbjct 9476 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGG 9535 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || || ||| || ||||| || | || | || Sbjct 9536 GGAATGCCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCC 9595 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || || ||||| || ||||| | ||||| | || ||||||||||| Sbjct 9596 ACCTCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATCTGCATTTT 9648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984259462943400