Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1685 95.1 4e-14 >seq1685 Length=141252148 Score = 95.1 bits (104), Expect = 4e-14 Identities = 380/587 (65%), Gaps = 15/587 (3%) Strand=Plus/Plus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || || || || || || | | || |||||||||||||| || | | | | Sbjct 47456367 TTTGTCATCTTTCCCATCGAGTACCATGGTATCTGGCAGATGTATAAGAAGGCGGAGGCT 47456426 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195 | || ||||| | || || || | ||||| ||| | | |||||||| |||| Sbjct 47456427 TCCTTCTGGACCACCGAGGAGGTGGACCTGTCCAAGGACATTGGC-ACTGGGAATCCCTG 47456485 Query 133196 A--CTGGGGATGAAAAACATTTTATTTCT-ATGATTTTAGCGTTTTTTGCTGCGAGTGAT 133252 | | ||| || | | ||||||| || ||| || | | || ||||| || || ||| Sbjct 47456486 AAGCCCGGG--GAGAGATATTTTATATCCCATG-TTCTGGTTTTCTTTGCAGCAAGCGAT 47456542 Query 133253 GGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCC 133312 || || || ||||||||| | || |||| | |||||| | | |||||| Sbjct 47456543 GGCATAGTAAATGAAAATTTGGTGGAGCGATTTAGCCAAATAGTTCAGATTACAGAAGCC 47456602 Query 133313 CGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACT 133372 || || ||||| | || ||||| |||||||| || |||||| | ||| | Sbjct 47456603 CGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTC 47456662 Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT--A 133430 || ||||| ||||||||||||||| | | | | | || ||||| |||||| | Sbjct 47456663 CTTATTGACACTTACATCAAAGATCTCAAAGAAAGGGAATTTCTCTTCAATGCCATTGAA 47456722 Query 133431 GCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490 ||| | |||||| | || ||||| | || ||||| | ||||| |||||| Sbjct 47456723 ACGA--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAG 47456780 Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550 || | | || | ||| | || || || |||| |||||| ||||| || || Sbjct 47456781 AGGCCACCTATGGTGAACGTGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCCA 47456840 Query 133551 GTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTT 133609 || | || ||| || || || ||||| || || || || | | ||||| || ||| Sbjct 47456841 GTTC-TTTTGCATCGATATTGTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACGTTT 47456899 Query 133610 TCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 || || ||| ||||| || || |||| || |||| || ||||| Sbjct 47456900 TCCAATGAATTTATTAGCAGAGATGAGG--GTTTACACTGATTTTGC 47456944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471487892620108