Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1399 82.4 6e-11 seq1044 82.4 6e-11 seq683 82.4 6e-11 >seq1399 Length=81552678 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || || || |||||| | || ||||| ||||| ||| | || |||| | Sbjct 65743821 AAAATGCAGATCTTCGTGAAAACTCTTACTGGCAAGACCATCACCCTTGAGGTGGAGCCC 65743880 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 | || || ||| | || || ||||| ||||| |||||| | ||| || Sbjct 65743881 AGTGACACCATCGAAAATGTGAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCCGAC 65743940 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | ||| || || |||||||| || | | || | | |||||| Sbjct 65743941 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 65744000 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || || ||||| || |||| |||| || | || |||| || Sbjct 65744001 AACATCCAGAAAGAGTCAACCCTGCATCTGGTCCTGCGTCTGAGAGGTGG 65744050 >seq1044 Length=11392 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || || || |||||| | || ||||| ||||| ||| | || |||| | Sbjct 9648 AAAATGCAGATCTTCGTGAAAACTCTTACTGGCAAGACCATCACCCTTGAGGTGGAGCCC 9589 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 | || || ||| | || || ||||| ||||| |||||| | ||| || Sbjct 9588 AGTGACACCATCGAAAATGTGAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCCGAC 9529 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | ||| || || |||||||| || | | || | | |||||| Sbjct 9528 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 9469 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || || ||||| || |||| |||| || | || |||| || Sbjct 9468 AACATCCAGAAAGAGTCAACCCTGCATCTGGTCCTGCGTCTGAGAGGTGG 9419 >seq683 Length=106955855 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || | || ||||||||||| ||| |||| |||| | | Sbjct 98905845 ATGCAGATCTTCGTGAAGACACTCACTGGCAAAACCATCACCCTCGAGGTGGAGCCCAGT 98905786 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || |||||| || || |||||| | || || ||| Sbjct 98905785 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAG 98905726 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731 ||||| || || | ||| || ||||||||||| |||||| || || | ||||| Sbjct 98905725 CAGAGGCTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGC----ACCCTGTCTGACTA 98905670 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||| || || ||||| || ||||| |||| || | ||| | ||||| Sbjct 98905669 CAACATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGGGG 98905619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398791804838476