Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq683 122 7e-23 seq1 116 3e-21 seq1399 109 4e-19 seq1044 109 4e-19 seq565 96.9 3e-15 seq944 95.1 9e-15 seq192 87.8 1e-12 seq1685 84.2 2e-11 seq334 84.2 2e-11 >seq683 Length=106955855 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| ||||| ||||| || || ||||| ||||| || ||||| || || | Sbjct 98905619 CCCCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 98905678 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || ||||| |||||| | |||| || ||||| || || || Sbjct 98905679 AGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 98905738 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | ||| |||||| | || | |||||| | || || Sbjct 98905739 ATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACC 98905798 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||||||||| | || || || || |||||||| Sbjct 98905799 TCGAGGGTGATGGTTTTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 98905845 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||||||||||| || || ||||| ||||| || || || || || | Sbjct 89490434 CCACCTCGCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTCTAGTCTGAG 89490493 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||| ||| || || |||||||| || |||||| | ||||| || ||| | Sbjct 89490494 AGACTGCGGCCATCCTCCAGCTGTTTGCCCACAAATATCAGACACTGCTGGTCAGGCAGG 89490553 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | ||| ||||||| | || | |||||| | || || Sbjct 89490554 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCCACC 89490613 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | || ||||| || | ||| || ||||| |||||||| Sbjct 89490614 TCAAGGGTGTTGGTCTTGCCCGTGAGGGTGTTCACAAAGATCTGCAT 89490660 >seq1 Length=122973662 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||||||||| || | |||| | ||| || ||||| || || | | ||||| | Sbjct 23279003 CGCAGCACCAGGTGCGGGGTGGGCTGTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCA 23278944 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || |||||||||||| |||||| | ||||| || || || |||||||| ||| Sbjct 23278943 TCCTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTG 23278884 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| |||||| | |||||| | || | |||||| | || || ||||| || || Sbjct 23278883 TCTTG-AATTTTGGCATTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGAT 23278825 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| || ||||| |||||||| Sbjct 23278824 GGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 23278789 >seq1399 Length=81552678 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| |||||| |||| ||| || || || ||||| || ||||| || || | | Sbjct 65744050 CCACCTCTCAGACGCAGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAA 65743991 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| ||| | || | || ||||| || || ||| Sbjct 65743990 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 65743931 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || || || | || || ||| |||| | |||||| | || || Sbjct 65743930 ATGCCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 65743871 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || || || |||||||| | ||||| || || ||||||||||| Sbjct 65743870 TCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATCTGCATTTT 65743821 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| |||||||| || || ||||||||||| || || | | | || || ||| Sbjct 71370983 CAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGACAAAGTACGTCCATC 71371042 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | ||| |||||||||||| || ||||| || || || || Sbjct 71371043 TTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 71371102 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || || ||| | || || || || || Sbjct 71371103 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGATTCAGCCTCGAGGGTGATGGT 71371162 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || | | |||||| || || ||||||||||| Sbjct 71371163 CTTCCCCATAAGGGTTTTCACGAAAATCTGCATTTT 71371198 >seq1044 Length=11392 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| |||||| |||| ||| || || || ||||| || ||||| || || | | Sbjct 9419 CCACCTCTCAGACGCAGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAA 9478 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| ||| | || | || ||||| || || ||| Sbjct 9479 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 9538 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || || || | || || ||| |||| | |||||| | || || Sbjct 9539 ATGCCTTCCTTATCCTGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 9598 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || || || |||||||| | ||||| || || ||||||||||| Sbjct 9599 TCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATCTGCATTTT 9648 >seq565 Length=117381234 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| | || || |||||||| || | || | | || || ||| Sbjct 50944584 CAACACAAGATGAAGAATAGACTCCTTTTGAATATTGTGGTCAGACAAAGTACGTCCATC 50944525 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || || || ||||||||| |||| |||||||||||| || ||||| || || || || Sbjct 50944524 TTCCAGCTGCTTGCCAGCAAGGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 50944465 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| ||||| || || || |||| || || || || ||||| Sbjct 50944464 CTGGATCTTGGCCTTCACATTTTCTGTCGTATCCGAGGGTTCAACCTCGAGGGTGATAGT 50944405 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| || || ||||||||||| Sbjct 50944404 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 50944369 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| | || || |||||||| || || | | | || || ||| Sbjct 72458835 CAACACAAGATGAAGAATAGACTCCTTTTGAATATTGTAGTTAGACAAAGTACGTCCATC 72458776 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || || || ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 72458775 TTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 72458716 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 | | || || ||| |||||| | || || |||| | || || || || || Sbjct 72458715 CCGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCATCCTCGAGGGTGATGGT 72458656 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| || || ||||||||||| Sbjct 72458655 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 72458620 >seq944 Length=110113093 Score = 95.1 bits (104), Expect = 9e-15 Identities = 152/217 (70%), Gaps = 15/217 (7%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA-AT 29632 || ||| | |||||| || || | ||||||||||| || || ||| || Sbjct 27807566 CAACACAAGATGAAGAGTAGACTGCTTTTGAATGTTGTAGTC------------AGACAT 27807613 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || ||||| ||||||||| | || |||||||||||| || ||||| || || || | Sbjct 27807614 CTTCCAGTTGCTTGCCAGCAAAGATTGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 27807673 Query 29693 CTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 | || || || || || ||| ||||| || || || |||| || || || || || Sbjct 27807674 CCTG-GATCTTGGTCTTTACATTTTCTGTCGTATCCGAGGGTTCAACCTCGAGGGTGATG 27807732 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 ||||| || || | ||||| ||||| |||||||||| Sbjct 27807733 GTTTTCCCTGTAAGAGTTTTCACAAAAATCTGCATTT 27807769 >seq192 Length=157873769 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||||| | || || | | || | ||| Sbjct 100760670 CAACACAAGATGAAGAGTAGACTCCTTTTGAATACTGTAGTCAGACAAAGTACATCCATC 100760611 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||| ||| || ||||| || || || || Sbjct 100760610 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTTATCAGGAGGAATTCCTTCCTTATC 100760551 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| | || || ||||| | || || || || Sbjct 100760550 CTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGAGTTCAGTCTTGAGGGTGATGGT 100760491 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| || || ||||||||||| Sbjct 100760490 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 100760455 >seq1685 Length=141252148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||||||| | |||| |||||| ||| | || ||||| || || || Sbjct 2033637 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGATGAGCAGGAGGAATTCCTTCCTT 2033578 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || | || || ||| |||||| | || || |||| || ||||| || || Sbjct 2033577 ATCCTGGATCTTGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAACCTCAAGGGTGAT 2033518 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || ||| |||||| || || ||||||||||| Sbjct 2033517 GGTCTTCCCCCTTAGGGTTTTCACGAAAATCTGCATTTT 2033479 >seq334 Length=143122389 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 29566 CTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTG 29625 |||| |||| | |||| || || || || ||||| || ||||| ||||| | || ||| Sbjct 30029504 CTCAGACGCTGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTG 30029445 Query 29626 CGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCC 29685 | ||| || || || |||| ||| | || | || ||||| || || | || || Sbjct 30029444 CAGCCATCTTCTAGCTGCATGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGAGGATGCCT 30029385 Query 29686 TCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGA 29745 || || || || | || || ||| |||| | |||||| | || || ||||| Sbjct 30029384 TCCTTATCCTGGATATTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGG 30029325 Query 29746 GTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || |||||||| | ||| || || || ||||||||||| Sbjct 30029324 GTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTT 30029281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385137115085244