Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1328 104 4e-17 >seq1328 Length=104879549 Score = 104 bits (114), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| | | |||||||| | || || || |||||||||||||| || || || Sbjct 5404214 TGGTGGTACTTTGTGTCTAAAGGAGTTGAGTATTTGGATACAGTGTTTTTTATTCTGAGA 5404273 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || || || ||| || || ||||| |||||||| | ||| |||||||| || Sbjct 5404274 AAGAAAAACAACCAAGTTTCTTTCCTTCACGTGTATCATCACTGTACGATGTTTACCTTG 5404333 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||| ||| |||||||||| || Sbjct 5404334 TGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 5404368 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600 |||||||| || || ||| ||||||| ||||||||||| |||||||| || ||||| Sbjct 5406383 GCATTTTTTGGAGCCCAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGG 5406442 Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660 | | || | ||| | | || | |||||| | |||||||| || ||||| ||||| Sbjct 5406443 TTAACTGCATTTGGCCCATGGATTCAGAAGTATCTTTGGTGGAAACGATACCTGACTATG 5406502 Query 58661 ATGCAATTGGT 58671 ||||| |||| Sbjct 5406503 TTGCAACTGGT 5406513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903213759482240