Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq1503 190 2e-43 seq1 183 4e-41 >seq1503 Length=86207423 Score = 190 bits (210), Expect = 2e-43 Identities = 237/325 (73%), Gaps = 0/325 (0%) Strand=Plus/Plus Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830 |||||| || || |||| | || || || || || | ||||| ||||| || | || Sbjct 9281796 CATAGACGGTGAGGCAGGCTGTTCCTGAGATCTTCCCAAAACCAAAGGTATTGAAGAGAC 9281855 Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890 |||| |||| ||||| ||||||| |||| | ||||| || || | || || ||| || Sbjct 9281856 ACATGTAACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTGAGTTTTGGA 9281915 Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950 |||| || || |||||||| | | |||||| || | |||||||| || || || || | Sbjct 9281916 GTCCCAGCTGGGTAATGTTTATCTTGTCCTTATAGGCAGGCTGGATCACCACCCCATGGT 9281975 Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010 |||||||||| ||| |||||||||| ||||| ||| || | |||||||| || || | Sbjct 9281976 TCTCGCTGAAGGTGACCATGTTTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTCACAA 9282035 Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070 | | |||| | | | |||| ||||||||| |||| ||||||||||||| || | Sbjct 9282036 TGAGGGCTTCCTGGGCATTTTGCAGAGAGCATTTTAAGGAAGCAGGTGTGTACAGCTGCT 9282095 Query 172071 CCCTTTCGTCTTGCGTTACCACCTG 172095 | ||||| || || || ||||| || Sbjct 9282096 CTCTTTCATCCTGGGTCACCACTTG 9282120 Score = 107 bits (118), Expect = 2e-18 Identities = 160/224 (71%), Gaps = 5/224 (2%) Strand=Plus/Plus Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562 || ||||| | | ||| || |||||||||| ||| | || | ||| |||||||||| Sbjct 9278953 ACGGTTTGCTTAAAGTCAGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCT-- 9279010 Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622 | ||||| ||| | ||||| ||||| | || || ||||| |||||||| || ||||| Sbjct 9279011 -TCCCCACCTGATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCA 9279069 Query 171623 TTACGATGTAGAACG-GTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAAAA 171681 || | || ||| | || ||||||||||| || || || | | || ||||| || Sbjct 9279070 TTTGGGTG-AGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGACCTTCCAGAA 9279128 Query 171682 TATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725 | | || ||||| | ||||| ||||||||||| || |||| Sbjct 9279129 GACCATGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATATTTA 9279172 >seq1 Length=122973662 Score = 183 bits (202), Expect = 4e-41 Identities = 598/921 (65%), Gaps = 11/921 (1%) Strand=Plus/Plus Query 162067 TTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCTCATCGAAC 162126 || |||| | || ||| || | |||||||| || || | ||| ||| | || ||| Sbjct 58505576 TTGTGTCTCAAATGCTCATCCAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAAC 58505635 Query 162127 TTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGATCCGAAC 162186 || || || |||| ||| || | | || |||| || | || || | |||||| Sbjct 58505636 TTATTGGCAAACAAGTGGTGTTGGCGCAGCA---TCCAGTTCAAGTCACCAGCTCCGAAA 58505692 Query 162187 ACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATCGTCCACA 162246 | |||||| || ||||| || || || ||| || || || | || || | | ||| Sbjct 58505693 ATGCACACTGAGCGCACATGGACTCCATCGCAGGGTGGGTAGGGAGCACCCTTGGAAACA 58505752 Query 162247 TCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGAGGTGTCG 162306 || ||||| |||| |||||||| || ||||| | | || |||||||| || || Sbjct 58505753 TCACCCTCAAAGTACTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCA 58505812 Query 162307 TACTTGTACACTGACGGCACG-GCTCCAGGAACACCCGGCAGTCTCTGTAGAGTAGCCCA 162365 ||||| | ||| | | | | || || || | || | || || | || ||||| Sbjct 58505813 TACTTATGG-CTGGCAGAGAGTGAGCCCGGGACTTCAGGAATCCTTTGGATGGTGGCCCA 58505871 Query 162366 CAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGACCGTTTT 162425 || | || || || || || || || | || |||||||| |||| || ||| Sbjct 58505872 GAGATACTCATCAGGGCTGTATGTGTCTTGCGCCCACTCCACAAACTTTTGGATTTTTTC 58505931 Query 162426 ATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACCAGAAAA 162485 || | ||| | ||| || || ||| | || | ||||| || || |||||||| Sbjct 58505932 ATTCTGTAGTACGTACCCCACATACTCCCTACTGACCACGAAGTAGGCACTGCCAGAAAA 58505991 Query 162486 CACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCATTCCCTC 162545 | ||| | | ||||| || |||| | || ||||| | | |||| | Sbjct 58505992 AAGAGGTGTTTCAAGCGGAGGAAGCATTTTGACAGTCCCTGTGTTTGTCAGCTTTCCATT 58506051 Query 162546 TACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTA-GACGGGTGTTCGGTCT 162604 |||||| | | | ||| ||||||| | |||| ||| | | | || || | Sbjct 58506052 AACGACCTCATACCGCTTTTTCCACCTTTCT-TCTTTATGGGATGGCATCCTCTCCGTTT 58506110 Query 162605 CTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGGTCTTAA 162664 | || |||| ||| || ||| |||| | || || ||||| ||||| |||| Sbjct 58506111 CCAGGTTGTTTTCTCCCATTAACAACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAA 58506170 Query 162665 GGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTCCGTACA 162724 ||||| || | || || ||||| || | || ||||| || | | | | | || | Sbjct 58506171 TAGGAAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCATTCATTGCATAGA 58506230 Query 162725 GATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGCTCT 162784 | |||| | ||||| || || ||||| ||||| |||||||| || || || || |||| Sbjct 58506231 GGTCCTTCATGCAGTTGAGGTCAGCCTGAACGCGGCTCCACGATGCATAAACCACACTCT 58506290 Query 162785 CCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTG 162844 |||| | |||| ||||||||||| ||||| ||| | || |||||||| || | Sbjct 58506291 CCAATCGGCTGGCCACAAAGACATTACTAAAACAGGAAGCGATGCCCATCACTGCAGCTA 58506350 Query 162845 AGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTA 162902 | | ||| || | ||| | || ||||| | ||| || | ||||||||| || Sbjct 58506351 AATAGGAATC--CTCGGATTTTGTGTCCACGTGAATGCAATAGAAATTCTGAGGCATATA 58506408 Query 162903 GATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACGC 162962 |||||||||||| | || || | ||| || ||||| || || ||||| |||||||| || Sbjct 58506409 GATGGCCCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGC 58506468 Query 162963 TATGGGGAACTCAGCCTCCTC 162983 ||| || ||||| ||||| || Sbjct 58506469 TATTGGAAACTCCGCCTCTTC 58506489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578305583686400