Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq1 104 7e-19 seq1210 98.7 3e-17 seq254 98.7 3e-17 seq2466 93.3 1e-15 seq1115 91.5 5e-15 seq1328 80.6 8e-12 >seq1 Length=122973662 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 74092194 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 74092135 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 74092134 CCGGGTTTCGGC 74092123 Score = 102 bits (112), Expect = 3e-18 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATC-TAAAGGTCCCTGGTTCAAC 2827 |||||| ||||||| |||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct 74043724 GCTGAAATAGCTCAATTGGGAGAGCGTTAGACTGAAGATCTTAAAGTTCCCTGGTTCAAC 74043665 Query 2828 CCCGGGCTTCAGC 2840 |||||| |||||| Sbjct 74043664 CCCGGGTTTCAGC 74043652 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 74044432 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 74044491 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 74044492 CCGGGTTTCGGC 74044503 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||| |||||||||||||| | | Sbjct 74271762 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCCCTGGTTCGATC 74271703 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 74271702 CCGGGTTTCGGC 74271691 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||||| | |||| |||| |||||||| | Sbjct 74109520 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAATTTTAAAAGTCCTTGGTTCAATC 74109461 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 74109460 CCGGGTTTCAGC 74109449 >seq1210 Length=99891981 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 98622619 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 98622678 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 98622679 CCGGGTTTCGGC 98622690 >seq254 Length=152096393 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 79868115 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 79868056 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 79868055 CCGGGTTTCGGC 79868044 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 79874887 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 79874828 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 79874827 CCGGGTTTCGGC 79874816 >seq2466 Length=17037 Score = 93.3 bits (102), Expect = 1e-15 Identities = 64/71 (90%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATC-TAAAGGTCCCTGGTTCAAC 2827 || ||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||| Sbjct 16180 GCCGAAATAGCTCAGTTGAGAGAGCGTTAGACTGAAGATCTTAAAGGTCCCTGGTTCAAC 16121 Query 2828 CCCGGGCTTCA 2838 ||| || |||| Sbjct 16120 CCCAGGTTTCA 16110 >seq1115 Length=110690730 Score = 91.5 bits (100), Expect = 5e-15 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110450833 GCCGAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 110450887 >seq1328 Length=104879549 Score = 80.6 bits (88), Expect = 8e-12 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835 |||||||| |||||||||||||||||||||||||||||||| |||||| | || ||| | Sbjct 6375749 TAGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGTCTCTGGTTTGATCCTGGGTT 6375808 Query 2836 TC 2837 || Sbjct 6375809 TC 6375810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15846569061180