Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq91 86.0 5e-12 seq1399 82.4 6e-11 seq1044 82.4 6e-11 >seq91 Length=163208435 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075 || |||| || |||| ||||| |||| || || || ||||| || || ||||||| Sbjct 66929492 TAATGCCACCTCGCAGGCGCAACACCAGGTGCCGGGTGGACTCTTTCTGGATGTTGTAGT 66929551 Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135 | | |||| | || || |||||||| ||||| | || |||||||| || || | Sbjct 66929552 CTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAG 66929611 Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195 | || | |||||| || || || ||| ||| | | || | ||||| ||| | Sbjct 66929612 GTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCT 66929671 Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || | |||| | || || || ||||||||||| ||||| Sbjct 66929672 CGACCTCAAGGGTGATGGTTTTGGCTGTGAGGGTCTTCACAAAGATCTGCAT 66929723 >seq1399 Length=81552678 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| || || |||||||| | |||| | Sbjct 65744038 CGCAGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 65743979 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || | ||||| | ||| || || || || | || || ||| Sbjct 65743978 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTA 65743919 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| |||| |||| | ||||| ||| || || || || || || Sbjct 65743918 TCCTGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 65743859 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || ||||||||||| ||||| ||||| Sbjct 65743858 GTCTTGCCAGTAAGAGTTTTCACGAAGATCTGCAT 65743824 >seq1044 Length=11392 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| || || |||||||| | |||| | Sbjct 9431 CGCAGGACCAGATGCAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 9490 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || | ||||| | ||| || || || || | || || ||| Sbjct 9491 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTA 9550 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| |||| |||| | ||||| ||| || || || || || || Sbjct 9551 TCCTGGATCTTAGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 9610 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || ||||||||||| ||||| ||||| Sbjct 9611 GTCTTGCCAGTAAGAGTTTTCACGAAGATCTGCAT 9645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424843852322208