Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1328 98.7 1e-15 seq1162 89.7 6e-13 >seq1328 Length=104879549 Score = 98.7 bits (108), Expect = 1e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| || ||| | |||||||| | || ||| | ||||| | || || || ||| Sbjct 5404212 TGTGGTGGTACTTTGTGTCTAAAGGAGTTGAGTATTTGGATACAGTGTTTTTTATTCTGA 5404271 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 |||||||| ||||||||| || | ||||| || || || | ||| |||||||| | Sbjct 5404272 GAAAGAAAAACAACCAAGTTTCTTTCCTTCACGTGTATCATCACTGTACGATGTTTACCT 5404331 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | | ||||| || ||||| ||| ||||||||||||| Sbjct 5404332 TGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 5404368 >seq1162 Length=100215132 Score = 89.7 bits (98), Expect = 6e-13 Identities = 199/299 (67%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 |||||| ||||||||||| || | ||| | || || ||||| | || ||| || Sbjct 7502423 ACTTCTTCTATTTCTGGATAAAAAATCTGTTCGCAAATGAGCTGTGCAATTCGATCACCT 7502364 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| || || | ||||||||| | | | ||| | |||||| || Sbjct 7502363 TTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTA 7502304 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| ||||| || |||||||| ||||| || || ||||| || || Sbjct 7502303 TAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGAC 7502244 Query 22815 CTAGGAGATATTCTTCCATATAATCCTTCCGGTATATCTATTATAATATCAGTCATTACT 22874 | | || | ||||||||| | || | | |||| ||| || || | || Sbjct 7502243 CGTGAAGCCACTCTTCCATAACACCCAGAAAGGAACGCTATCTGAATGTCCGTTTTCACA 7502184 Query 22875 AATTGTTTACCCATAGGTTCTATTACGTAATTATACGCGCTATATAGATCATATCCTGC 22933 | ||| |||||||| |||| ||||| ||| || || || || || || ||||| Sbjct 7502183 AGAGCTTTCTCCATAGGTAGTATTGTGTAATCATAAGCACTGTACAGGTCGTAGCCTGC 7502125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603048974836160