Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq91 118 7e-22 seq1611 104 1e-17 seq683 95.1 8e-15 seq1 95.1 8e-15 seq1399 86.0 4e-12 seq1044 86.0 4e-12 >seq91 Length=163208435 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| || |||||||||| || | ||| ||| || || ||||| || ||||| Sbjct 66929496 GCCACCTCGCAGGCGCAACACCAGGTGCCGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 66929555 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || ||||| ||||||||||| | |||||| ||||| || || Sbjct 66929556 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 66929615 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| | ||| || | ||| ||||| | ||| | Sbjct 66929616 GATACCCTCCTTGTCT-TGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 66929674 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || | ||| || ||||| | || | || |||||||| ||||||||||| Sbjct 66929675 CCTCAAGGGTGATGGTTTTGGCTGTGAGGGTCTTCACAAAGATCTGCATGTT 66929726 >seq1611 Length=34552619 Score = 104 bits (114), Expect = 1e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| || ||||||||| || || ||| ||| || || || || || ||||| Sbjct 276739 GCCACCTCGCAGGTGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGA 276798 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || || ||||| ||||||||||| | | |||| ||||| || || Sbjct 276799 GAGAGTGCGGCCGTCCTCCAGCTGTTTGCCGGCAAATATCAGATGCTGCTGGTCAGGTGG 276858 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTG-TGTCTTCGCTCTCCA 34657 || |||||||||||| ||| ||| | | | || | | || |||| | ||| | Sbjct 276859 GACACCCTCCTTGTCT-TGAATTTTGGCTGTGACATTCTCAGTGATGTCACTGGGCTCGA 276917 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGT 34708 | || ||| || ||||| || | | || |||||||| |||||||||| Sbjct 276918 CCTCAGTGGTGATGGTTTTGCCCATGAGGGTCTTCACAAAGATCTGCATGT 276968 >seq683 Length=106955855 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| ||||||| ||||| || || ||| ||| || || || || || ||||| Sbjct 89490433 GCCACCTCGCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTCTAGTCTGA 89490492 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || | || | || || || ||||| || ||||||| | || ||| ||||| ||| | Sbjct 89490493 GAGACTGCGGCCATCCTCCAGCTGTTTGCCCACAAATATCAGACACTGCTGGTCAGGCAG 89490552 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| | ||| || | ||| ||||| | ||||| Sbjct 89490553 GATGCCCTCCTTGTCTTGGAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCCA 89490611 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| | || || || || | || |||||||| |||||||| Sbjct 89490612 CCTCAAGGGTGTTGGTCTTGCCCGTGAGGGTGTTCACAAAGATCTGCAT 89490660 >seq1 Length=122973662 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| || |||| ||||| || | ||| || || || ||||| || ||||| Sbjct 23279016 GCCACCTCACAGGCGCAGCACCAGGTGCGGGGTGGGCTGTTTCTGGATGTTGTAGTCTGA 23278957 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || ||||| || |||||||| | |||||| ||||| || || Sbjct 23278956 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGG 23278897 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| | || || | ||| ||||| | ||| | Sbjct 23278896 GATACCCTCCTTGTCT-TGAATTTTGGCATTGACATTCTCAATGGTGTCACTGGGCTCGA 23278838 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || | || |||||||| |||||||| Sbjct 23278837 CCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 23278789 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/229 (69%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| || |||| ||||| | || || ||| || || ||||| || |||| Sbjct 90237701 GCCACCTCGCAGGCGCAGCACCAGGTTTAGGTTGGACTCTTTCTGGATGTTGTAGCCTGA 90237642 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || | || || || |||| || |||||||| | |||||| ||||| || || Sbjct 90237641 GTGTG---GC-CATCCTCCAGCTGTTCCCCAGCAAATATCAGACGCTGCTGGTCAGGTGG 90237586 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| ||| ||| | ||| || | |||| ||||| | ||| | Sbjct 90237585 GATACCCTCCTTGTC-CTGAATTTTGGCTTTGACATTCTAAATAGTGTCACTGGGCTCGA 90237527 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || || || |||||||| |||||||| Sbjct 90237526 CCTCAAGGGTGATGGTCTTGCCCGTGAAAGTCTTCACAAAGATCTGCAT 90237478 >seq1399 Length=81552678 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||||| |||| || || || |||||| || ||||| || || ||| Sbjct 65744278 CCACCTCTCAGACGCAGGACCAGGTGTAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 65744219 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || ||||| || | | ||| ||||| || || Sbjct 65744218 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 65744159 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || || || || |||||| || | | || ||||| | ||||||| Sbjct 65744158 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 65744099 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || ||||| | || ||||| || |||||||| Sbjct 65744098 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 65744052 >seq1044 Length=11392 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||||| |||| || || || |||||| || ||||| || || ||| Sbjct 9191 CCACCTCTCAGACGCAGGACCAGGTGTAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 9250 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || ||||| || | | ||| ||||| || || Sbjct 9251 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 9310 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || || || || |||||| || | | || ||||| | ||||||| Sbjct 9311 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 9370 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || ||||| | || ||||| || |||||||| Sbjct 9371 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 9417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314662535449772