Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq126 214 2e-50 seq118 206 3e-48 seq4 111 2e-19 seq22 93.3 4e-14 >seq126 Length=6050536 Score = 214 bits (236), Expect = 2e-50 Identities = 431/631 (68%), Gaps = 20/631 (3%) Strand=Plus/Plus Query 16166 TCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCT 16225 || |||||| | || |||||||| | ||| || || || ||||| || |||| || Sbjct 4678543 TCCGACGGTTTGTGTCCCAGGTGTTTGAGCATCAGTCAGGCAAAGTCACAGTGTAAACCC 4678602 Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || |||||||| |||||||| |||||||| || || ||||| |||||||||||| Sbjct 4678603 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGGGCCA-GGCATCAGTCCTCGTTTCTTG 4678661 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCG 16345 | ||||||||| | ||||| || || ||||| || || || || || | |||||| || Sbjct 4678662 AGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTCCACTGCTGCAAAGGCT 4678721 Query 16346 ATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCT 16405 | | ||||| | || ||||| ||||| | | |||||| | ||| | || Sbjct 4678722 ACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCAAGGCCCCAGCTGCC 4678781 Query 16406 TTTTGTTTTATACAATCCATCGTTTCTATGGCCTT--AAACAATTTCTCTTTTTCCTGAA 16463 || | || | |||| ||| |||| || || || | | || ||| | |||| || Sbjct 4678782 TTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAGAAATTCCC--TTTCTTGGG 4678839 Query 16464 TATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGG 16523 ||| | || || || ||||| || | ||| |||||||| || || ||||| || |||| Sbjct 4678840 AATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGG 4678899 Query 16524 CTATCT-GAAAT--------CCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGT 16574 | || | | ||| | |||||| || || ||||| | || || ||||| | Sbjct 4678900 CAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGC 4678959 Query 16575 AAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCC--AA 16632 |||||||||| ||| ||| ||||| || || || |||||||| || ||||| ||| || Sbjct 4678960 TAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCGAAAAAAGCCAGAA 4679019 Query 16633 TATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTT 16692 ||||| | ||||| ||| | || | | | | | ||| | | | || || Sbjct 4679020 CATGTGAT--ATGAAGTATCTCTCTTTGGGCTTCAAGGTTGCCCAGTGCTGAATGTCCTT 4679077 Query 16693 GGATATATCCACTTCTTCTGGCGTCCA-AAAGCTAGCCACTGCCTTTTTATACATTTTCC 16751 || | |||||| || || | |||||| |||| | || | || || |||||||||| || Sbjct 4679078 AGAAAGATCCACCTCCTCAGCCGTCCACAAAGACA-CCTCCGCTTTCTTATACATTTGCC 4679136 Query 16752 AAATATCATTGTATTGTATGGGAAATACGAC 16782 |||| |||| ||||| || ||||| | ||| Sbjct 4679137 AAATGTCATGGTATTCGATAGGAAAGATGAC 4679167 >seq118 Length=6727830 Score = 206 bits (228), Expect = 3e-48 Identities = 569/871 (65%), Gaps = 27/871 (3%) Strand=Plus/Plus Query 15913 TTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTC 15972 |||||| || || | ||| || ||||| || |||||||| | ||||| |||||||| Sbjct 3435600 TTGGTACTCTGAAATTCATTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTC 3435659 Query 15973 CATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 |||||||||||||||||| || || ||| | ||| ||| | || ||||| || || Sbjct 3435660 CATAAAATCAAAGGGATTTTCTGCCTGGAAA-ACCTTTGAGAATCCAAGTTCTACAAGTA 3435718 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTC 16091 |||| | || ||||| || |||| || ||| || ||||| ||||| | || Sbjct 3435719 ATCTGTTAGCCACAAACTCAGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGA 3435778 Query 16092 GTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATAT 16151 || || | ||||| ||||||||| | || || || || || || ||||||| | Sbjct 3435779 CAACTGGTAAAGCTTCTGTTAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCT 3435838 Query 16152 CGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGT 16211 | || ||| ||| || || ||| | || | ||| || || | || |||| Sbjct 3435839 CCCTGACTCTCTCTTCTGAAGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGT 3435898 Query 16212 CGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTT 16271 | || || || ||||| ||||||||||||||||| ||||||||||| | || | ||| Sbjct 3435899 CACAGTGCAGACCTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAA 3435958 Query 16272 TTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAA 16331 ||| ||||||| | ||||||| |||||||| || || || ||||| || | || | Sbjct 3435959 GAACTCTCTTCTTTAGCTAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTA 3436018 Query 16332 CAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCT 16391 ||| ||||| || | | || |||| | | |||| | | ||| |||||| | Sbjct 3436019 CAGCAGCAAAGGCCACCACTCTTTCCCCCAAAGTAGATTTTATATCTGCTATCCATCACA 3436078 Query 16392 GTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCT 16451 ||| || ||||||| | | ||| ||| ||||| || | ||||| || | Sbjct 3436079 AGGTCCAATCTGCTTTTTTCTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAAT 3436138 Query 16452 CTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTA 16511 | ||| || ||| | || || || || | || ||||||||||| |||||||| | Sbjct 3436139 CCCTTTTCTTGGGATC--TGATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAA 3436196 Query 16512 TGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCA 16571 ||||| ||| |||| || |||| | | || || ||| Sbjct 3436197 CATTCTCGATG----------------AGAATTTGTGAACCTCTGGAACCTGCACCTCC- 3436239 Query 16572 CGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCA 16631 | | | | ||| ||| ||||| | || || ||||| || |||||||| || | Sbjct 3436240 --TGA----CTGACACCACGTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTA 3436293 Query 16632 ATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTT 16691 | ||||| | ||||||| || || ||| |||| | | ||| | | ||||| Sbjct 3436294 AAATGTGAGAGACCCAATATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTT 3436353 Query 16692 TGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCC 16751 | |||| || || ||||||| ||||| ||| || | ||| ||| || |||||| Sbjct 3436354 TTGATAAGTCAACCTCTTCTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCC 3436413 Query 16752 AAATATCATTGTATTGTATGGGAAATACGAC 16782 || ||||| ||| || || | ||| | ||| Sbjct 3436414 AAGTATCAGGGTACTGGATTGCAAAGATGAC 3436444 >seq4 Length=47749213 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||||||||| ||||||||||| | ||| ||||| |||| |||| Sbjct 24674284 CTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCT 24674225 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||| ||||||||| |||||||| || || || ||||| || || || |||| ||||| | Sbjct 24674224 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 24674165 Query 16344 CGATTAATCGTTCC 16357 | | | || |||| Sbjct 24674164 CCACCACTCTTTCC 24674151 >seq22 Length=23169006 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || |||||||| |||||||| |||||||| || | || ||||| |||||||||||| Sbjct 2785904 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2785845 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 | ||||||||| | ||||| || || |||||||| || || || || | ||||| || Sbjct 2785844 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGGC 2785786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511364581844760