Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq223 228 6e-55 seq283 109 4e-19 seq12 84.2 2e-11 >seq223 Length=2232465 Score = 228 bits (252), Expect = 6e-55 Identities = 519/771 (67%), Gaps = 10/771 (1%) Strand=Plus/Plus Query 18579 TTTGGAATGCAAGCTCGATACAATTTGCGAAATGAATTTCCTCTTTTAACTACAAAGCGT 18638 ||||| ||||| || || |||| | | |||||||||| || | || || || || Sbjct 1612400 TTTGGCATGCAGGCCCGCTACAGCCGGAAAGATGAATTTCCACTGCTGACAACCAAATGT 1612459 Query 18639 GTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGGTCAACCGATTCC 18698 || || |||| || || |||| |||||| | ||||||||| || || || | | Sbjct 1612460 GTGTTCTGGAAGGGTGTTTTGGAGGAGTTGCTGTGGTTTATCAAGGGATCCACAAAAGCT 1612519 Query 18699 AAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGAT--CGAGCAAATTTC 18756 ||||| || | | |||| | | || |||||| | ||| |||| | ||| Sbjct 1612520 AAAGAGCTATCTTCCAAAGGAGTGAAAATCTGGGATGCCAATGGACACCGAG--ACTTTT 1612577 Query 18757 TAAATAGGAATGGCTTCCATAAAAGACACACGGGGGACCTTGGCCCCATTTACGGCTTCC 18816 | |||| || || |||||| | || ||| |||||| |||| ||||||| Sbjct 1612578 TGGATAGCCTGGGATTATCCAAAAGAGAAGAAGGTGACTTTGGCCTAGTTTATGGCTTCC 1612637 Query 18817 AGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTATTTACAGCAAGGAA 18876 ||||||| ||||||||||| ||||| ||||| | ||| | |||| | |||||| Sbjct 1612638 AGTGGAGGCATTTTGGAGCAGAATACAAAGATATGGATTCAGATTATTCAGGTCAAGGAG 1612697 Query 18877 TCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGA 18936 | | || |||| | || || ||||| || ||||| ||||| || | || |||| | Sbjct 1612698 TT-ACCAATTGCAGAAAGTGATTGATACCATCAAAACCAACCCTGATGACAGAAGAATCA 1612756 Query 18937 TTATATCGT-CTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACG 18995 | || ||| ||||||| ||||| ||| | || | ||| ||||||||| || || | Sbjct 1612757 TCATG-CGTGCTTGGAACCCAAAAGATCTTCCTCTGATGACACTACCTCCGTGCCATGCC 1612815 Query 18996 TTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGG 19055 || || ||||| ||||| | ||||||||| | || |||| | |||||| || || Sbjct 1612816 TTCTGCCAGTTCTACGTGGTGAACGGTGAACTGACC-GCCAGCTGTACCAGCAGTCAGGA 1612874 Query 19056 GATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTA 19115 || | |||||| || || |||||||||||||| | || | || || || |||| | Sbjct 1612875 GACACGGGCCTGGGTGTGCCGTTCAACATTGCCAGCTACTCCCTGCTCACGTACAAGATC 1612934 Query 19116 GCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATT 19175 |||| | || || || || | || || || | ||||| |||| |||||||||||| Sbjct 1612935 ACGCACATCACTGGTCTGAAGCCAGGTGACTTTGTACATACTTTGGGAGATGCACATATT 1612994 Query 19176 TACTTGAATCATATAGATGCTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCT 19235 ||| ||||||| | || | | || | ||||| || |||| ||||||||| Sbjct 1612995 TACCTGAATCACGTGGAGCCGCTGAAGATTCAGCTTCAGAGAGAACCAAGACCTTTTCCG 1613054 Query 19236 TGCCTTAAAATTATTCGAAATGTAACAGA-TATAAACGACTTTAAATGGGACGATTTTCA 19294 || ||||| || |||| || ||| || | || || ||| || || ||| | Sbjct 1613055 AAGCTCAAAATCCTTTGAAAAGT-TGAGACAATTGATGATTTCAAAGCTGAAGACTTTAA 1613113 Query 19295 GCTTGATGGATATAATCCACAccccccccTAAAAATGGAAATGGCTCTTTA 19345 | |||| || || |||| || || || | ||||||||||||||| |||| Sbjct 1613114 GATTGAAGGTTACAATCAGCATCCAACCATTAAAATGGAAATGGCTATTTA 1613164 >seq283 Length=1095284 Score = 109 bits (120), Expect = 4e-19 Identities = 300/457 (66%), Gaps = 2/457 (0%) Strand=Plus/Minus Query 18885 CTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCG 18944 ||||||| || || ||||| ||| |||||||||| || | | || |||| || | || Sbjct 231379 CTGCAAAAAGTGATTGATACCATTGAAACAAACCCTGACAACAGAAGAATCATCACATGT 231320 Query 18945 TCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAG 19004 ||||||| ||||| ||| | || | |||| || ||| | | ||| | | || ||| Sbjct 231319 GCTTGGAACCCAAAAGATGTACCTCTGATGGCGCTGCCTTCGTATCATGCCCTTTGCCAG 231260 Query 19005 TTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGC 19064 || | | | | ||||| ||||||| || | |||||| || || || || ||| Sbjct 231259 TTCTTCAGGGTGACTGGTGAGCTATCCTGTCAGCTGTACCAGCAGTCAGGAGACATAGGC 231200 Query 19065 CTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTT 19124 || || | || |||||||| || | | | || || ||||| || | | || || Sbjct 231199 CTGGGCTTGCCATTCAACATGGCCAGTCACTCCCTGCTCACCTATATGATCTCACACGTC 231140 Query 19125 ACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAAT 19184 || || || || | || || || | ||||| |||| |||||| |||||||| ||||| Sbjct 231139 ACCGGTCTGAAGCCAGGTGACTTTGTACATACTTTGGGAGATGCATATATTTACCTGAAT 231080 Query 19185 CATATAGATGCTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAA 19244 || || || | | || | |||| || | || |||||| | || ||| Sbjct 231079 CACATTGAGCCACTGAAGATTCAGCGTCAGAGAGAACTAAGACCTTTCTCAAAGCTCAAA 231020 Query 19245 ATTATTCGAAATGTAACAGATA-TAAACGACTTTAAATGGGACGATTTTCAGCTTGATGG 19303 || ||| ||| || | ||||| | | || || ||| | || |||||| |||| || Sbjct 231019 ATCCTTCTAAAAGTGA-AGATAATTGATGATTTCAAAGCTGGAGACTTTCAGATTGAAGG 230961 Query 19304 ATATAATCCACAccccccccTAAAAATGGAAATGGCT 19340 || || || || || | |||||||||||||| Sbjct 230960 TTACGGTCTGCAACCAACCATTGAAATGGAAATGGCT 230924 >seq12 Length=32490354 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| ||||||||| || || | | || ||||| ||||| | |||||||| | ||| Sbjct 30593005 ATGGCACTACCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAACGGTGAGCTGTCC 30593064 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||| | || || || ||||| || || || ||||||||||| || | Sbjct 30593065 TGCCAGCTGTACCAGCGGTCAGGAGACATGGGTCTGGGTGTGCCGTTCAACATCGCCAGC 30593124 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCA 19120 || | || || || ||||| | ||||| Sbjct 30593125 TACTCCCTGCTCACGTACATGATCGCGCA 30593153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399466056233685