Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq11 515 3e-141 seq223 224 7e-54 seq35 179 3e-40 seq17 131 1e-25 seq170 107 1e-18 seq12 82.4 6e-11 >seq11 Length=36342412 Score = 515 bits (570), Expect = 3e-141 Identities = 453/565 (80%), Gaps = 0/565 (0%) Strand=Plus/Minus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||||| |||||| ||||| ||||||||| |||||||||| | ||||||||| || || | Sbjct 15735346 ATTAATCATTCTTTTCATACACTTCAAATCTGTACTTAATGCCTTTCTCTTCCTGGACGT 15735287 Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087 ||||||||||| ||| |||||| | |||||| ||||||| | ||||| ||| |||| Sbjct 15735286 CAGAAAGAACACCTGGGTATTCTGAGAGAAGTTTATATTTCTTCAAATCAATTTCAGGAA 15735227 Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATG 4147 |||| ||||||||||||||||| ||||||||||| |||||||||||||||| || || || Sbjct 15735226 AAAATGTGTCACATTCAAAGTCCTGCATGATCCTTGTCACAAACAGTTTAACATGGCCTG 15735167 Query 4148 GATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTT 4207 | | | |||| ||||| ||||| |||||||| || || | |||||| ||||||||||||| Sbjct 15735166 GTTGATTCATGGCTTCCTTATAAACAGAACTGCCCCCTACTATCCAAACCATGTCTACTT 15735107 Query 4208 TATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAA 4267 |||||||||||||||| | || || ||||||| |||||||| | ||| ||||| | || Sbjct 15735106 TATTTGCTAATTCTGGTTCCTCAATATGTTTTAAGGCATCATCCAGACTTTTAGCAAGAA 15735047 Query 4268 AATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTT 4327 ||||||||| |||| | ||||| ||||| | |||||||| | ||| |||||| | | Sbjct 15735046 AATGAGCTCCTTGTGAAGATTCCTTGAGTTCTCTACTGAGAACTATATTTATTCTGTCCT 15734987 Query 4328 TTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAAT 4387 ||||||| || |||||||||||||| |||||||| ||||| ||||||||||||| | || Sbjct 15734986 TTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAGAT 15734927 Query 4388 TCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCA 4447 |||||||| || ||| ||||| || || ||||||||||| |||| || || |||||| Sbjct 15734926 TCTGTTTACCTTCTACTGAAGAGGTTGTGGTCATTCTTTGAAAATAGTTGAATTCATTCC 15734867 Query 4448 TAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAA 4507 | ||| ||||| |||| | || | ||||| |||||| |||| || | ||||| | Sbjct 15734866 TGAGTGGGGGCCAGGGCAGATCCCCATTCTTGCCGATGCCCCTGTTCTGGGACACAGCGA 15734807 Query 4508 CAATGCAGTTTAGTGCTTGAACCAT 4532 ||||||||||| |||||||| Sbjct 15734806 TGATGCAGTTTAGCCGATGAACCAT 15734782 >seq223 Length=2232465 Score = 224 bits (248), Expect = 7e-54 Identities = 499/741 (67%), Gaps = 6/741 (1%) Strand=Plus/Minus Query 101534 TAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTCA 101593 |||| |||||| | ||||||||| | || || | || || ||| | ||| ||| Sbjct 1613164 TAAATAGCCATTTCCATTTTAATGGTTGGATGCTGATTGTAACCTTCAATCTTAAAGTCT 1613105 Query 101594 TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGT 101653 || ||||| || |||||||| ||| |||| | | | | || | ||||| ||| Sbjct 1613104 TCAGCTTTGAAATCATCAATTGTCTCAACTTTTCAAAGGATTTTGAGCTTCGGAAAAGGT 1613045 Query 101654 CTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCA 101713 || || || | | ||| || || || | || | ||||| | || || || ||| Sbjct 1613044 CTTGGTTCTCTCTGAAGCTGAATCTTCAGCGGCTCCACGTGATTCAGGTAAATATGTGCA 1612985 Query 101714 TCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAA 101773 ||||| | |||||| | ||| || || ||| ||| ||||| || | ||| || | Sbjct 1612984 TCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGACCAGTGATGTGCGTGATCTTGTAC 1612925 Query 101774 GTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTT 101833 || | || || ||||| |||||||| || ||||| || | ||| | || |||| Sbjct 1612924 GTGAGCAGGGAGTAGCTGGCAATGTTGAACGGCACACCCAGGCCCGTGTCTCCTGACTGC 1612865 Query 101834 TGATACAGTTGACAGGAAAGCTTTCCAT-CACAGACATAAAATTGACTTAATACATGACA 101892 || ||||| || | || || | || | ||| || || || || | || |||| || Sbjct 1612864 TGGTACAGCTGGC-GGTCAGTTCACCGTTCACC-ACGTAGAACTGGCAGAAGGCATGGCA 1612807 Query 101893 AGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCT 101952 || || | ||| ||||| ||| |||||||||| ||| | || ||||| Sbjct 1612806 CGGAGGTAGTGTCATCAGAGGAAGATCTTTTGGGTTCCAAGCACGCATGATGATTCTTCT 1612747 Query 101953 ATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCC 102012 || |||||| ||||| || |||||||||| | | ||||||| |||||||| || Sbjct 1612746 GTCATCAGGGTTGGTTTTGATGGTATCAATCACTTTCTGCAATTGGT-AACTCCTTGACC 1612688 Query 102013 TTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATA 102072 | |||||| | | | |||| ||||||||||| |||||||||||||| || ||||| Sbjct 1612687 TGAATAATCTGAATCCATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAGCCATA 1612628 Query 102073 CACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCT 102132 || | |||| || ||||| ||||| | | || || || |||| ||||| || Sbjct 1612627 AACTAGGCCAAAGTCACCTTCTTCTCTTTTGGATAATCCCAGGCTATCCAAAAAGTCTCG 1612568 Query 102133 AGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTT-GCTGTCAGTAG 102191 |||||| |||||||| || | ||| || | ||||||||||| ||| | || | Sbjct 1612567 GTGTCCATTGGCATCCCAGATTTTCACTCCTTTGGAAGATAGCTCTTTAGCTTTT-GTGG 1612509 Query 102192 ATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAG 102251 |||| |||||||||||| || || || | |||||| |||| || || | || || | Sbjct 1612508 ATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAACACACATTTGGTTG 1612449 Query 102252 TTAAAAGTGGAAATTCATTTT 102272 | | ||||||||||||| || Sbjct 1612448 TCAGCAGTGGAAATTCATCTT 1612428 >seq35 Length=16640991 Score = 179 bits (198), Expect = 3e-40 Identities = 185/242 (76%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990 |||| |||| | | | | | || ||||| || || || |||||||| || ||| ||| Sbjct 1060972 AGCTCTTAGGCCAAGTGGCGGACGATGGGGGTGACACAGGTGCAGCCCACGTCCACCAGC 1060913 Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050 |||||||| ||| || || |||||| | | | || || | |||| || || ||| Sbjct 1060912 ATCTTCTCCAGCTGGAAGGAGCGGGGGCAGTGCTTAGGCTCTCTTCGCAGGACCAGGATC 1060853 Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110 || || ||||| ||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct 1060852 TCCTGCTGGATGGGGACAGAGTTCATGTGGTAGTCCACATTCCCTTCCGCATTCACGCAG 1060793 Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170 || |||| ||||||||| |||||||| ||||| ||||||||||| || |||| |||||| Sbjct 1060792 CCCAAGTGGCGACACTTGGCTTCCCAGATCACTGAGGGATATCTCTCAGGATCCTCATTG 1060733 Query 27171 CG 27172 || Sbjct 1060732 CG 1060731 >seq17 Length=29863360 Score = 131 bits (144), Expect = 1e-25 Identities = 101/120 (84%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| |||||||| || || | |||||| ||||||||||||||||||||||||||||| Sbjct 14675405 TTATAAACAGAACTGCCCCCTACTATCCAAACCATGTCTACTTTATTTGCTAATTCTGGT 14675464 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 | || |||||||||| |||||||| | ||| ||||| | ||||||||||| |||||| Sbjct 14675465 TCCTCAATAAGTTTTAAGGCATCATCCAGACTTTTAGCAAGAAAATGAGCTCCTTGTGGA 14675524 Score = 129 bits (142), Expect = 4e-25 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115 |||||| ||||||| | ||||| |||||||||||| ||||||||||||||||| ||||| Sbjct 14671131 AAGTTTATATTTCTTCAAATCAATTTCTGGAAAAAATGTGTCACATTCAAAGTCCTGCAT 14671190 Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166 |||||| |||||||||||||||| || || ||| | | |||| ||||| || Sbjct 14671191 GATCCTTGTCACAAACAGTTTAACATGGCCTGGTTGATTCATGGCTTCCTT 14671241 Score = 120 bits (132), Expect = 2e-22 Identities = 92/109 (84%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| | |||||||| | |||||||||| | |||||||| || ||||||||||| Sbjct 14683139 CTTGAGTTCTCTACTGAGAACTATATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCAGG 14683198 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| ||||||||||||| | |||||||||| || Sbjct 14683199 AATGGAGAACCAGGTCTTCCTACCCATAATCACCAGATTCTGTTTACCT 14683247 Score = 100 bits (110), Expect = 2e-16 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||||| |||||| ||||| |||||||||||||||||||| | |||||||||||| |||| Sbjct 14665291 ATTAATCATTCTTTTCATACACTTCAAATTTGTACTTAATGCCTTTCTCTTCTTGGACAT 14665350 Query 4028 TAGAAAGAACACTTGGATAT 4047 ||||||||| | ||| ||| Sbjct 14665351 CAGAAAGAACTCCTGGGTAT 14665370 >seq170 Length=3845361 Score = 107 bits (118), Expect = 1e-18 Identities = 344/527 (65%), Gaps = 9/527 (2%) Strand=Plus/Plus Query 101711 GCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATG 101770 |||||||| | ||||| | ||| || || ||| | || | | || | |||||| Sbjct 2788989 GCATCTCCCAAGGTATGTACAAAGTCACCTGGCTTTGGACCCGCGGAGTGCACCATCATG 2789048 Query 101771 CAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGAT 101830 || || | || || | ||| || ||||| || |||| || | ||||| || |||| Sbjct 2789049 CAGGTGACCAGGGAGTGGCTGGCCATGTTGAACCGCACACCCAGGCCCATGTCTCCTGAC 2789108 Query 101831 CTTTGATACAGTTGACAGGAAAGCTTTCCA-TCACAGACATAAAATTGACTTAATACATG 101889 | || | ||| || ||| | |||| ||| |||| || |||| || | | | || Sbjct 2789109 CACTGGTGCAGCTGGCAGCACAGCTCACCAGTCACC-ACGAAAAACTGGCAGAGGGCCTG 2789167 Query 101890 ACAAGGCGGCAACACCATTTTAGGA--ATGTCTGAAACATTCCAAGCACACATTAACATC 101947 || || |||| | |||| |||| || | ||| || |||||||| | | || Sbjct 2789168 GCATGGAGGCAGCGCCATGGGAGGAGGATCTTTGAGTTAT---AAGCACACGTGATGATT 2789224 Query 101948 CTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCT 102007 ||||| || |||||| ||| | || || ||| ||| | || || | ||||| ||||| Sbjct 2789225 CTTCTGTCATCAGGGTTGGTTCTGATGGTCTCAGTCAGTTTTTGTAGTCGGTCAGCTCCT 2789284 Query 102008 TCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAAT 102067 | ||| || ||| | | | |||| |||| ||| || |||||||||||| |||| Sbjct 2789285 TGACCTGAATGATCTGAATCCATATCTTTGTATTGTGCCCCAAAATGCCTCCACGGAAAG 2789344 Query 102068 CCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAAT 102127 ||| || || || | || |||| ||||||| | || | ||| | || |||| Sbjct 2789345 CCACTGACTGGGCCCAAGTCCCCTTTCTCTCTGTTGGAGAATCTCAGTCTGTC-CAAAAG 2789403 Query 102128 GATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCA 102187 | | ||| |||| ||| ||| | | ||| || | || || ||||| || Sbjct 2789404 GCTTGGGATGCATTGGCACTCCAGAGTTTCACTCCCTTGGAAGACAGTTCTTTAGCGTTT 2789463 Query 102188 GTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCA 102234 || ||||| |||||||| ||| || ||| ||| |||||| |||| Sbjct 2789464 GTGGATCCCTTGATAAACTACAGCAACTCTCCAA-AACACCCTTCCA 2789509 >seq12 Length=32490354 Score = 82.4 bits (90), Expect = 6e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||| ||||| |||||||||||||| || ||||| || || || | || |||| Sbjct 30589934 CTTTGTATTCGGCTCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCACCTT 30589875 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | ||||| | | || || || |||| ||||| || || ||||| |||||||| | Sbjct 30589874 CTTCTCTTTTGGAGAATCCCAGGCTATCCAAAAAGTCTCGGGACCCATTGGCATCCCAGA 30589815 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180 | | ||| || | ||||| ||||| Sbjct 30589814 TTTTCACTCCCTTGGAAGATAGTTCTTT 30589787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361216889377043