Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq126 336 3e-87 seq118 181 1e-40 seq22 129 7e-25 seq4 111 2e-19 seq1 111 2e-19 >seq126 Length=6050536 Score = 336 bits (372), Expect = 3e-87 Identities = 444/610 (73%), Gaps = 17/610 (3%) Strand=Plus/Plus Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 ||||| | ||||| || || || || ||||||| |||||| ||||| ||||| | ||| Sbjct 4678564 TGTTTGAGCATCAGTCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 4678623 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 |||||||| ||| | || ||||| || || || || || ||||| ||||| || ||||| Sbjct 4678624 TTGGAAAATGTGGG-CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAA 4678682 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---A 24296 || |||||||| || |||||||| ||||| |||||||| | || | ||||||||| | Sbjct 4678683 GAACCAGAAAAAAAGATTCCTTCCACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTA 4678742 Query 24297 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356 | | |||| ||||| |||| | | |||||||| || |||||| ||||| Sbjct 4678743 GCCTCTTTGTCCCCAATCCAACGCAAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATT 4678802 Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416 | || |||||||| |||||| | | |||| | |||||||| || || ||||| Sbjct 4678803 ATTTCAATAGCATTGAAGAGAAATTCCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATA 4678862 Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTT-GAAAT--------CCG 24467 | |||||||||||||| |||||||||||||| ||||| |||| | ||| | Sbjct 4678863 AGGAGACTATACATTTCAGAATGAATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTA 4678922 Query 24468 TAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCA 24527 |||||||| | ||||| |||||||| |||||| | ||||||||| | || |||||| Sbjct 4678923 TAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCA 4678982 Query 24528 TTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG 24587 || ||||| || ||||| ||||| ||||| |||| |||||| ||| || ||| | || Sbjct 4678983 TTTACTATGCCATCACTTGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATCTCTC- 4679041 Query 24588 TCTGGTGTT--AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTG 24645 | ||| || || || ||| | | || || ||||| | |||||| || || | | Sbjct 4679042 TTTGGGCTTCAAGGTT-GCCCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCG 4679100 Query 24646 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAA 24705 |||| || || |||| || || |||||||| | ||| |||||||| |||| || |||| Sbjct 4679101 TCCACAAAGACACCTCCGCTTTCTTATACATTTGCCAAATGTCATGGTATTCGATAGGAA 4679160 Query 24706 AAATAACAAA 24715 | || ||||| Sbjct 4679161 AGATGACAAA 4679170 >seq118 Length=6727830 Score = 181 bits (200), Expect = 1e-40 Identities = 555/856 (65%), Gaps = 34/856 (4%) Strand=Plus/Plus Query 23864 TTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATT 23923 ||| || || ||||| ||||| |||| || || ||||||||||| ||||| | ||||| Sbjct 3435618 TTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAAGGGATT 3435677 Query 23924 GGTAACATTATAGATTCTTTTA-AATCCCAATTCAGAAATCAATCTATCTGCGACAAACT 23982 | | | | |||| | ||||| | ||| || ||||| | || ||||||| Sbjct 3435678 -TTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTACAAGTAATCTGTTAGCCACAAACT 3435736 Query 23983 CCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAG 24042 | |||| | |||||| |||||||||||| | || |||||| | ||| | | Sbjct 3435737 CAGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAGCTTCTG 3435796 Query 24043 TAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCAC 24102 | | ||| || || ||||| ||| || || | || || || ||| | ||||| Sbjct 3435797 TTAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACTCTCTCTTCTG 3435856 Query 24103 TCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGT 24162 || || | || | | ||| |||| | || || || ||||| ||||| || | Sbjct 3435857 AAGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAGACCTTCAT 3435916 Query 24163 CTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 24222 |||| || || | ||| |||||||| |||||||| | ||| || | | ||| || ||| Sbjct 3435917 CTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTTCTTTAGCT 3435976 Query 24223 AAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAA 24282 | ||||| | ||||| ||||| || |||||||||| |||||| || |||||||| | | Sbjct 3435977 AGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAAGGCCACCA 3436036 Query 24283 GTCTTTCTCCATAACCGGCGCTGTCAT-----GTATCCACTTTTGAGCCCAATCGGCCTT 24337 |||||| || || | | | | || |||||| | |||||| || || Sbjct 3436037 CTCTTTCCCCCAAA--GTAGATTTTATATCTGCTATCCATCACAAGGTCCAATCTGCTTT 3436094 Query 24338 CTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATC 24397 || | ||||| |||||||| || || ||||||| | | | | ||| || ||| Sbjct 3436095 TTTCTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTTGGGATC 3436154 Query 24398 TTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCAT 24457 | | || || || | | | ||| ||||| || || |||| || || ||| || Sbjct 3436155 --TGATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAACATTCTCGATGAGAAT 3436212 Query 24458 TTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGC 24517 ||| ||| |||| | || ||| || || || | | Sbjct 3436213 TTG--------TGAA--------CCTCTGGAACCTGCACCTCCTGAC-------TGACAC 3436249 Query 24518 TAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 24577 | |||||||| | ||||| ||||||||||||||||| || || | || | | Sbjct 3436250 CACGTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGACCCA 3436309 Query 24578 ATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTC 24637 |||||| || |||| | | || || ||||| | | || |||||| |||| || || || Sbjct 3436310 ATATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATAAGTCAACCTC 3436369 Query 24638 TTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTG 24697 ||| ||||||| || ||||| | | ||| ||| || | ||||| | ||| | || || Sbjct 3436370 TTCTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCAAGTATCAGGGTACTG 3436429 Query 24698 AATTGGAAAAATAACA 24713 |||| ||| || ||| Sbjct 3436430 GATTGCAAAGATGACA 3436445 >seq22 Length=23169006 Score = 129 bits (142), Expect = 7e-25 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 2785906 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2785847 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| ||||| || ||||| || ||||||||||| |||||||| ||||||||||||| Sbjct 2785846 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGG 2785787 Query 24277 CAATAAGTCTTTCTCC 24292 | | || | |||||| Sbjct 2785786 CTACAACACGTTCTCC 2785771 Score = 113 bits (124), Expect = 5e-20 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||||| || || ||||| | |||||||||||||| |||||||||||||| ||||| Sbjct 2782831 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGGC 2782772 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||| || || |||||||| | ||||| |||||||| |||||| | |||||| || Sbjct 2782771 AATTTGGAAGCCATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 2782712 >seq4 Length=47749213 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218 || ||||| || || | ||| |||||||| ||||| || ||||| || || | ||| || Sbjct 24674282 TCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCTTT 24674223 Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 24674222 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 24674163 Query 24279 ATAAGTCTTTCTCC 24292 | | |||||| || Sbjct 24674162 ACCACTCTTTCCCC 24674149 >seq1 Length=73491278 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 31008377 TCCAGCCGTAGAAGTGCATACTAGTCAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 31008318 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| ||| || |||||||| || || || || || || || |||||| | | || || | Sbjct 31008317 TCAAAGACTGGCTTTGATCAATAAAAGCACCTCTCTCGGCTGCCATTGTGAGGACAGTTT 31008258 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | ||||||||| | ||||||||||| |||| | || || |||| Sbjct 31008257 TCTGAGAAATTTCCCATACAGTTTTATAAAGCTGCTTCAGGTCATCAGGAA 31008207 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | Sbjct 31005464 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 31005405 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 || |||||||| |||| || ||||| ||||| || || ||||| || || | | |||| Sbjct 31005404 GATTCATTATTCCCCAGGATCTGAGCGGTTGAAGCTGTAGGCATTGGGGCAATAAGTAAA 31005345 Query 53270 CTATTTCTAAGACCGTA 53286 || ||||| | ||| || Sbjct 31005344 CTGTTTCTTATACCATA 31005328 Score = 105 bits (116), Expect = 8e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| |||| ||| |||||||||||||| | || || || || || || || || | | Sbjct 30965877 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAAGA 30965818 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||||| || || || | ||||| | || || ||| |||| || | || ||| || | Sbjct 30965817 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 30965758 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||||||||| || || ||| |||||| |||||||| || ||||| Sbjct 30965757 GTTCTACCGTGGTGACCCCACTATATAAGCCTTGGATTACTTTCAT 30965712 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 30995012 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 30994953 Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144 ||||| || |||||||| ||||| || | ||| || ||| | | || || | |||||| Sbjct 30994952 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTGCATGCCA 30994893 Query 54145 CGGTTCCAAGTATAT 54159 || |||||||| || Sbjct 30994892 AGGCTCCAAGTAGAT 30994878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593663764094640