Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq87 374 1e-98 seq288 324 2e-83 seq179 233 2e-56 seq46 215 6e-51 seq2 127 2e-24 seq115 107 2e-18 >seq87 Length=8592345 Score = 374 bits (414), Expect = 1e-98 Identities = 419/560 (75%), Gaps = 0/560 (0%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| || ||||| ||||| | | | ||| | |||| ||||||||||| || Sbjct 403063 AGCAGGGCTTCTATGTCTGGCTCAATGTTGATGGTTGGAAAGCGACGGCTGTACCTGTGC 403004 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 || ||| || |||| ||||| | ||||||||| || ||||| || | ||| |||| | Sbjct 403003 ACAGGCACACCATCAGGACCCATGAGGAACTTCTCAAAATTCCACGCAATGTCATTGCAG 402944 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| | ||||||| ||| | || |||||| ||| ||| | | ||||||||| Sbjct 402943 CACACCAGGGACCAGGTAATTAACTTGGGGTCAGTCATGAGTGCAGTGGCGTCGTCGCTG 402884 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 ||||| |||||||| || || || ||||| |||||| || ||| | ||||| || ||| Sbjct 402883 GGCGCTGGCAGGGCTTCCCGCAGAAAGGCAAAGAGCCCGTGAGCCTTCGCACCATTCACC 402824 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 | ||||||||| ||||| || ||||| ||||| || || || || | | |||||| Sbjct 402823 TTGCACTTCTCAAAGAGAATGAAGTTGGGCTCAAACCCTCCGCCGGGTTGAATGTGCTTG 402764 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGG 83416 ||| | || ||||| | |||| ||| |||||||| || || |||||||| |||||| Sbjct 402763 AGGATATTCAGAATCTCTTCGTTCTTGGCATTTTCCTGATGCCCAAACTGGTTGCACGGG 402704 Query 83417 AACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTG 83476 || |||||||| ||||| || | | ||| |||| |||||||||||||||||| || Sbjct 402703 AAGCCAAGCACGACCAGGCCTCAGGGTCCAAGGCATTGCTGCAGCTCGTTCATCTCGGTA 402644 Query 83477 TACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCC 83536 || |||||||| ||| | ||||||||||||||| | ||||| ||||||| ||| |||| Sbjct 402643 TAGTCCCGGACAGTGGTGCCTCAGAGGGACGCTGCATTCTCAATGAGCAGCACCTTGCCC 402584 Query 83537 CGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCTGAGAAGGCGTAC 83596 || | | | || | ||||||||| || || |||| | |||| |||||||||||||||| Sbjct 402583 CGCAGGGAACCCAGGCTCACAGGCTCCCCGCCGGCCAGTGGGCATGCTGAGAAGGCGTAC 402524 Query 83597 ACAGATCTGGTCTCTGCCGC 83616 || ||| || | | ||||| Sbjct 402523 ACGGATTGGGCCGCAGCCGC 402504 >seq288 Length=1046208 Score = 324 bits (358), Expect = 2e-83 Identities = 399/540 (74%), Gaps = 8/540 (1%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 ||||| || || | ||| ||||| | | | | |||| | |||| |||||||||||||| Sbjct 594066 AGCAGCGCTTCCAGGTCTGGCTCGATGTCGATGGTCGGAAAGCGACGGCTGTACCTGCGC 594007 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 ||||| ||||||| |||| ||| ||||||||| ||| |||| || ||||| |||||| Sbjct 594006 CCGGGCACACCGTCAGGACCCCCCAGGAACTTCTCAAAGGTCCACGCAACGTCTTTGCGG 593947 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCG-TGCTCATGTCGTCGCT 83235 ||||| |||||||||| ||| || | ||||| || ||| | ||| |||||||||| Sbjct 593946 CACACCGGAGACCAGGTGGTGAACTTGAGGTCGGCCATGAGTGCAGCT-GTGTCGTCGCT 593888 Query 83236 AGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGAC 83295 ||||| |||||||| || || || || || |||| || || ||| | ||||| || || Sbjct 593887 GGGCGCTGGCAGGGCTTCCCGCAGAAAAGC--AGAGTGGGTGCGCCTTCGCACCATTCAC 593830 Query 83296 CTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTT 83355 ||||| ||||| |||||| | ||||| |||||||| || | || || | || || ||| Sbjct 593829 CTCGCCCTTCTTGAAGAGTGTCAAGTTGGGCTCGAATCCTCTGCCGGGTCAGATGTACTT 593770 Query 83356 CAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGG 83415 |||||| || ||||| | || | | ||||||||| || || |||||||| ||||| Sbjct 593769 GAGGGAATTCAGAATCTCTTCGTTTTTAGTGTTTTCCTGATGCCCAAACTGGTTGCACGG 593710 Query 83416 GAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGT 83475 ||| ||||| ||||| || || | || |||||| ||||||| ||||||||| || Sbjct 593709 GAAGTGGAGCACGACCAGGCCTCGGGGCCCAAGGCGCTGCTGCAGGTCGTTCATCCCGGT 593650 Query 83476 GTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCC 83535 || | |||||| ||| | ||||||||||| || || ||||| |||| || ||| Sbjct 593649 GT-CGTCCGGACAGTGGTGCCTCAGAGGGAAGCCACATTCTC---CAGCAGCGCCTTGCC 593594 Query 83536 CCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCTGAGAAGGCGTA 83595 || | | | || ||||| ||| || || |||| | |||||| |||||||| || || Sbjct 593593 TCGCAGGGAACCCCGGCTCAGAGGCTCCCCGCCGGCCAGCGGGCGCGCTGAGAAAGCCTA 593534 >seq179 Length=3343005 Score = 233 bits (258), Expect = 2e-56 Identities = 254/337 (75%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| || ||||| ||||| | | | | ||| | |||| ||||||| ||||| Sbjct 1629108 AGCAGGGCTTCTATGTCTGGCTCGATGTCGATGGTTGGAAAGCGACGGCTGTATCTGCGA 1629167 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 || ||| || |||| |||||| | ||||||||| |||||||| || | ||| |||||| Sbjct 1629168 ACAGGCACACCATCAGGACCCACGAGGAACTTCTCAAAGTTCCACGCAATGTCATTGCGG 1629227 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| || ||||||| ||| | || |||||| ||| ||| | | ||||||||| Sbjct 1629228 CACACCGGGGACCAGGTAATTAACTTGGGGTCAGTCATGAGTGCAGTGGCGTCGTCGCTG 1629287 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 ||||| |||||||| || || || ||||| |||||||| || ||| | ||||| || ||| Sbjct 1629288 GGCGCTGGCAGGGCTTCCCGCAGAAAGGCAAAGAGCGGGTGAGCCTTCGCACCATTCACC 1629347 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 ||||||||||| ||||| | ||||| ||||| || || || || ||||||||||| Sbjct 1629348 TCGCACTTCTCAAAGAGAGTGAAGTTGGGCTCAAACCCTCCGCCGGGTCGGACGTGCTTG 1629407 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 ||| | || ||||| | |||| ||| ||||||| Sbjct 1629408 AGGATATTCAGAATCTCTTCGTTCTTGGCATTTTCCT 1629444 Score = 205 bits (226), Expect = 1e-47 Identities = 181/226 (80%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || || |||||||| |||||||| |||||||| ||||| || || | ||| |||| Sbjct 1629739 CCTGATGCCCAAACTGGTTGCACGGGAAGCCAAGCACGACCAGGCCTCGGGGTCCAAGGC 1629798 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 || |||||||||||||||||| || || |||||||| ||| | |||||||||||||||| Sbjct 1629799 GCTGCTGCAGCTCGTTCATCTCTGTATAGTCCCGGACAGTGGTGCCTCAGAGGGACGCTA 1629858 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 | ||||| ||||||| ||| |||||| | | | || | ||||||||| || || |||| Sbjct 1629859 CATTCTCAATGAGCAGCACCTTGCCCCGCAGGGAACCCAGGCTCACAGGCTCCCCGCCGG 1629918 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGATCTGGTCTCTGCCGC 83616 | |||||| || |||||||||||||| ||| || | | ||||| Sbjct 1629919 CCAGCGGGCGCGCCGAGAAGGCGTACACGGATTGGGCCGCAGCCGC 1629964 >seq46 Length=13992998 Score = 215 bits (238), Expect = 6e-51 Identities = 336/476 (71%), Gaps = 22/476 (5%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| || ||||| ||||||| | | ||| | ||| ||||||||| |||| Sbjct 5861110 AGCAGGGCTTCCATGTCTGGCTCCATGTGGATGGTTGGAAAGCTA-GGCTGTACCGGCGC 5861052 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 |||||| | || || |||| ||| ||||||||| ||||||| | ||| |||| | Sbjct 5861051 ACGGGCACACTGTTAGGACCCTCCAGGAACTTCTCACAGTTCCAAACACAGTCATTGCAG 5860992 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| || ||||||| ||| || |||||| || ||| | | |||||||||| Sbjct 5860991 CACACCGGGGACCAGGTGGTGAACTTGGGGTCAGTCCTGAGTGCAGTGGTGTCGTCGCTG 5860932 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 ||| | |||||||| || || || ||||| |||| || || || ||||| || ||| Sbjct 5860931 GGCCCTGGCAGGGCTTCCCGCAGAAAGGCAGAGAGTGGGTGAACCTCCGCACCATTCACC 5860872 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGC--- 83353 |||| |||||| ||||| | ||||| ||| ||| | | ||||| |||| || | Sbjct 5860871 TCGCTCTTCTCCAAGAGAGTGAAGTTGAGCTTGAACCTTCTGCCAGGTCGGATGTACCTG 5860812 Query 83354 ----TTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTT 83409 |||||| || || |||| |||||| ||| |||||||| || || Sbjct 5860811 AGACTTCAGGAAATTCAGAATCTATTCATTCTTGGCATTTTCCTG-------AATTG--- 5860762 Query 83410 ACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCAT 83469 || ||||| |||||||| ||||| || || | ||| |||||| |||||||||||||||| Sbjct 5860761 -CA-GGGAAGCCAAGCACGACCAGGCCTCGGGGTCCAAGGCGCTGCTGCAGCTCGTTCAT 5860704 Query 83470 CTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCA 83525 || ||| || | | ||| ||| | || | |||||| | || | || | |||||| Sbjct 5860703 CTCAGTATAGT-TCAGACAGTGGTGCC-CGAAGGGACACCACATCCTGGGTGAGCA 5860650 >seq2 Length=55144334 Score = 127 bits (140), Expect = 2e-24 Identities = 207/288 (72%), Gaps = 9/288 (3%) Strand=Plus/Minus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || || | | ||| || ||| ||| ||||||||| ||| ||| Sbjct 3604600 GCAGCTGCGCAGCATCTATGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCGCGCCTGC 3604542 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || | || || |||||||| || |||||||||| || || | ||||||| Sbjct 3604541 TGGTGCACCTCTTCCCCGAGCTCTTCACGCATGAGAACCTGCGCAAACAGTACAACTGCA 3604482 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACTAT 50587 ||| ||| |||||||| |||| || |||||| ||| | | | |||| ||||| Sbjct 3604481 GCGGGTCCCTGGGCAAGAAGCAG-CTGGACCCGGCCCGCATCAGGCTCATCCGCCACTAC 3604423 Query 50588 GTGCAGTTGCTGCACCCG-GCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGC 50646 |||||| ||||| ||||| ||| | | ||||| |||||||||| ||||| ||| Sbjct 3604422 GTGCAGCTGCTGTACCCGCGCGCCAAG-AACGACCGCGTGTGGACTCTGGAGTTCGTGGG 3604364 Query 50647 GTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 ||||| ||||||||||||||||| | |||||| || |||||| Sbjct 3604363 CAAGCTGGATGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 3604318 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 49919 TCCTCTCCCGGGGAGCTGGCGGTGCTCCTACTGCACAAGGTCTTCCAGGAGCTCTTTGAC 49978 ||||| ||||||||| | ||||| |||| || ||| | |||||| |||||||||||| Sbjct 3605061 TCCTCACCCGGGGAGTTCGCGGTCTTCCTCCTCCACCGGCTCTTCCCTGAGCTCTTTGAC 3605002 Query 49979 GCGCGCCAGCTGCGCC-GCTGCTACAGCTGCTACGGCGACGGGCGCACGCATTGTCTGGA 50037 || ||||| || || | |||||||||||||| ||||| ||| ||| ||||| Sbjct 3605001 CACCGGAAGCTGGGCGAGCAG-TACAGCTGCTACGGGGACGGCGGCAAGCAGGAGCTGGA 3604943 Query 50038 CCCTGCGCGCCTGCAACTGATCCGGCACTGCGTGGCGCTTTGCTTCCC 50085 || ||| ||||| | ||||| ||| | || | | | |||||| Sbjct 3604942 TCCCCAGCGGCTGCAGATCATCCGCAACTACACGGAGATCTACTTCCC 3604895 >seq115 Length=6948065 Score = 107 bits (118), Expect = 2e-18 Identities = 235/346 (68%), Gaps = 6/346 (2%) Strand=Plus/Minus Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCG 83115 ||| ||| || |||||||||||| | | | ||| || || | ||||||| | ||| Sbjct 5485899 GAGGAGGCGCTTGATGTCGGGCTCAATGTTGATGGTGGGGAAGGTGCGGCTGTAGCGGCG 5485840 Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175 | |||| || || | || | | |||||||||||||||||||||||| || ||| Sbjct 5485839 GAAGGGCTCCCCCTCCGGCCCTATGAGGAACTTCTCGAAGTTCCAGGCCACATCTGAGCG 5485780 Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCT 83235 || |||||| ||| |||| || ||| ||| ||| ||| | | ||||||| | Sbjct 5485779 GCGCACTGGGCTCCAAATGATGAACTTGGGATCGGTCATGAGGGAAAGCGGGTCGTCG-T 5485721 Query 83236 AGGCGCCGGCAGGGCCTCTCGT--AGGAAGGCGAAGAGCGGATGTGCCCT-TGCACCGTT 83292 | | | || | || | || | ||| ||||||||| || || | | ||| || || Sbjct 5485720 AAGGGTAGG-GGAGCTTGTCCTTCAGGTAGGCGAAGACTGGGTGCTCATTCTGC-CCATT 5485663 Query 83293 GACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTG 83352 ||||| ||||| | || || ||||| | |||| ||| || |||||| ||||||| Sbjct 5485662 CACCTCACACTTTTGGACAAGGGTAAAGGTGGGCTGGAATCCACCCCCAGGGCGGACGTA 5485603 Query 83353 CTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGA 83398 || ||| || |||||| ||||||| ||| |||||| || Sbjct 5485602 CTGGAGGCTGTTCAGGATCTCTTCATTCTGACAGTTCTCCTGGGGA 5485557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608737495581720