Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq46 107 2e-18 seq25 107 2e-18 seq158 93.3 4e-14 seq51 86.0 5e-12 seq212 84.2 2e-11 seq21 84.2 2e-11 >seq46 Length=13992998 Score = 107 bits (118), Expect = 2e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || ||||| || || ||||| ||||| | || || | | ||||||||||| ||||| Sbjct 3038103 GTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTGCTTGCCT 3038044 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || ||||||||||| || | ||||| || || |||||| ||| Sbjct 3038043 GCAAAGATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTATCCTGGATCTTGGCCTTC 3037984 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || |||| ||||||| |||| ||| ||||||||||| || | ||| Sbjct 3037983 ACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTT 3037924 Query 21159 TTGACAAATATTTGCATTTTGA 21180 || || || ||||||||||||| Sbjct 3037923 TTTACGAAGATTTGCATTTTGA 3037902 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| || ||||| || || || || ||||| | | Sbjct 3038605 CCCCTC--AGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATATTGTAGTCAGAAA 3038548 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 | || | | || || ||||| ||||| ||| | || || ||||||||||| || | Sbjct 3038547 GAGTACGACCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGA 3038488 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 ||||| || || |||||| ||||| | | | || |||| ||||||| | Sbjct 3038487 TACCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCT 3038428 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAA 21166 ||| ||| |||||||||||||| | || || ||||| Sbjct 3038427 CCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAA 3038391 >seq25 Length=21972308 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || | ||| | ||| | ||||||||||||||||||||| ||||| | | Sbjct 20948576 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 20948517 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || | || ||||| || ||||| ||| |||| ||||| ||||| || || Sbjct 20948516 AAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGA 20948457 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || |||||| ||||||| | | ||||| ||| || Sbjct 20948456 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACC 20948397 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 || | || |||||||| || || | ||||| ||||| || ||||| |||| Sbjct 20948396 TCAAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTTGA 20948345 >seq158 Length=4245986 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 || || | ||| | ||| | ||||||||||||||||||||| ||||| | || || | Sbjct 3727841 AGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCT 3727782 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | || ||||| || ||||| ||| |||| ||||| ||||| || || | |||||| Sbjct 3727781 CCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCC 3727722 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 || || |||||| ||||| | | | ||||| ||| || || | || Sbjct 3727721 TTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 3727662 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 |||||||| || || | ||||| ||||| || ||||| || Sbjct 3727661 ATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 3727621 >seq51 Length=12882142 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/231 (68%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| || | || ||||| || || || || ||||| | | Sbjct 9170553 CCCCTC--AGACGGAGGACCAGGTGTAGGGTTGACTCTTTCTGGATATTGTAGTCAGAAA 9170496 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 | || | || || | ||| ||||| ||| | || || ||||||||||| || | Sbjct 9170495 GAGTACCACCATCTTCAAACTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGA 9170436 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 ||||| || || |||||| ||||| | ||| || |||| ||||||| | Sbjct 9170435 TACCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCT 9170376 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||| ||| ||||||||||| || | |||| | || ||||||||||||| Sbjct 9170375 CCAGGGTGATGGTCTTGCCAGTCAGGCTTTTTATGAAGATTTGCATTTTGA 9170325 >seq212 Length=2426081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/222 (68%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 || || | ||| | ||| | ||||||||||||||||||||| |||| || || | Sbjct 1901301 AGTCTTAACACAACATGAAGAGTGGACTCCTTTTGAATGTTGTAGT----CAAAGTACGT 1901246 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | || ||||| || ||||| ||| |||| ||||| ||||| || || | |||||| Sbjct 1901245 CCATCTTCCAGTTGCTTGCCTGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1901186 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 || || |||||| ||||| | | | ||||| ||| || | || | || Sbjct 1901185 TTATCCTGGATCTTGGCCTTCACATTTTCTATCGTATCTGAGGGTTCAGCATCAAGAGTG 1901126 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||||||| || || | ||||| || || || ||||| ||| Sbjct 1901125 ATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCATCTTG 1901084 >seq21 Length=25602908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/203 (69%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||||||||||||||||||||| ||||| | || || | | || ||||| || ||||| Sbjct 20609870 AGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTACGTCCATCTTCCAGTTGCTTGCC 20609811 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| |||| ||||| ||||| || || | ||||| || || |||||| || Sbjct 20609810 AGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGGATCTTGGCCTT 20609751 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAA-CG 21156 ||| | | | ||||| ||| || | || | || |||||||| || ||| | Sbjct 20609750 CACATTTTCTATTGTATCCAAGGGTTCAATCTCGAGAGTGATGGTCTTCCCCCATAAGGG 20609691 Query 21157 TTTTGACAAATATTTGCATTTTG 21179 || | |||||||| ||||| ||| Sbjct 20609690 TTATTACAAATATCTGCATCTTG 20609668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422219095008788