Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq126 212 6e-50 seq46 140 3e-28 seq11 111 2e-19 seq51 102 8e-17 seq212 95.1 1e-14 seq25 95.1 1e-14 seq96 93.3 4e-14 seq158 91.5 2e-13 seq102 91.5 2e-13 seq22 82.4 8e-11 >seq126 Length=6050536 Score = 212 bits (234), Expect = 6e-50 Identities = 435/640 (68%), Gaps = 15/640 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || || |||| | | || ||||||||| | || || || || || || |||||| ||| Sbjct 4679199 GAACCACTGCCG-GAGAAAACCCCCGCGGCTTTGTCATCTTTCCTATCGAATACCATGAC 4679141 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || || || |||| ||| || ||||| | ||||||||||| || Sbjct 4679140 ATTTGGCAAATGTATAAGAAAGCGGAGGTGTCTTTGTGGACGGCTGAGGAGGTGGATCTT 4679081 Query 116696 TCCAAGGACA-CGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 || ||||||| ||| |||||| |||||| ||| ||| | | ||||| || Sbjct 4679080 TCTAAGGACATTCAGC-ACTGGGCAACCTTGAAGCCCAAAGAGAGATACTTCATATCACA 4679022 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TT 116813 || ||||| |||||||| || || || ||||| || || || || |||| || || || Sbjct 4679021 TGTTCTGGCTTTTTTCGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAACGATT 4678962 Query 116814 TCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGC---------TTTCAGA 116864 | || || || || ||| | | ||||| || || ||||| || | || | Sbjct 4678961 TAGC-CAAGAAGTTCAGATTACAGAGGCCCGTTGTTTCTATAGCCATAGAAATTGCCAAA 4678903 Query 116865 TCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCT 116924 | |||||||| ||| | || || ||||||||| ||| || ||||| ||| | Sbjct 4678902 TTGCCATGGAAAACATTCATTCTGAAATGTATAGTCTCCTTATTGACACTTACATTAAAG 4678843 Query 116925 CTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGA 116984 ||| | || | | | | || || || || || | |||| || ||||| ||| Sbjct 4678842 ATTCCCAAGAAAGGGAATTTCTCTTCAATGCTATTGAAATAATGCTTTGTGTCAAGAAGA 4678783 Query 116985 AGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGG 117044 |||| | |||| |||| ||||| | | || |||||| ||| || || || | | Sbjct 4678782 AGGCAGCTGGGGCCTTGCGTTGGATTGGGGACAAAGAGGCTACCTATGGAGAACGTGTTG 4678723 Query 117045 TGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGC 117104 | ||||| || || || || || |||| ||||| || ||| ||| | ||||| |||| Sbjct 4678722 TAGCCTTTGCAGCAGTGGAAGGAATCTTTTTTTCTGGTTCTTTTGCCTCAATATTCTGGC 4678663 Query 117105 TCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACG 117164 |||||||||| || || ||||| |||| || || ||| || || || ||| || | Sbjct 4678662 TCAAGAAACGAGGACTGATGCCTGGCC-CACATTTTCCAATGAACTTATTAGCAGAGATG 4678604 Query 117165 AGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA 117204 ||||| | || || ||||||||||| || || |||| || Sbjct 4678603 AGGGTTTACACTGTGACTTTGCCTGACTGATGCTCAAACA 4678564 >seq46 Length=13992998 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||||||||| || || ||||| ||||||||| | || || || || Sbjct 3037904 AAAATGCAAATCTTCGTAAAAACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 3037963 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | || ||||| || ||||| | ||| Sbjct 3037964 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGGATCCCTCCCGAC 3038023 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | ||||| || |||||| Sbjct 3038024 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTAC 3038083 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| ||| | || || || || || ||||| ||||||| || Sbjct 3038084 AACATCCAGAAAGAGTCAACCCTCCACCTGGTCCTGCGCCTGAGGGGTGG 3038133 >seq11 Length=36342412 Score = 111 bits (122), Expect = 2e-19 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || || |||||| | || ||||||||||| || || || || || || |||||| ||| Sbjct 29862445 GAACCACTGCTG-GAGAAAACCCCCGCCGCTTTGTCATCTTTCCTATCGAATACCATGAC 29862503 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT-GGACCT 116694 || |||| ||||| || || || |||||||| || ||||| | |||||||| ||| || Sbjct 29862504 ATTTGGCAAATGTATAAGAAAGCGGAGGCGTCTTTTTGGACGGCTGAGGAGGTGGGATCT 29862563 Query 116695 GTCCAAGGACA-CGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGC 116753 || ||||||| |||| ||||||| |||||| | ||| | | ||||| | Sbjct 29862564 TTCTAAGGACATTGAGC-ACTGGGAAACCTTGAATCCTGAAGAGAGATACTTCATATCAC 29862622 Query 116754 ACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCAT 116787 | || ||||| |||||||| || || || ||||| Sbjct 29862623 ATGTTCTGGCTTTTTTCGCAGCAAGTGATGGCAT 29862656 >seq51 Length=12882142 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||| |||||| || || ||||| ||||||||| | || || || || Sbjct 9170327 AAAATGCAAATCTTCATAAAAAGCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 9170386 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | || ||||| || ||||| | ||| Sbjct 9170387 AGTGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAAGGTATCCCTCCTGAC 9170446 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| ||| | || || | | || || |||||| Sbjct 9170447 CAGCAGAGGCTCATCTTTGCTGGCAAGCAGTTTGAAGATGGTGGTACTCTTTCTGACTAC 9170506 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || |||||||| ||| | || || || || || | || ||||||| ||| Sbjct 9170507 AATATCCAGAAAGAGTCAACCCTACACCTGGTCCTCCGTCTGAGGGGTGGC 9170557 >seq212 Length=2426081 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||||||||| |||||||| || |||||||| | || | ||| || Sbjct 1901085 AAGATGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTTGATGCTGAACCC 1901144 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | ||| | |||| || || | || || || || || || | || Sbjct 1901145 TCAGATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1901204 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||| ||||||| | || ||||| || ||||| || | || || | |||||| Sbjct 1901205 CAGCAAAGACTCATTTTTGCAGGCAAGCAACTGGAAGATGGACGTACTTT----GACTAC 1901260 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||| || |||||| |||| || ||| | ||||| Sbjct 1901261 AACATTCAAAAGGAGTCCACTCTTCATGTTGTGTT 1901295 >seq25 Length=21972308 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || |||||||| ||||| || || |||||||| | || || ||| || Sbjct 20948347 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTTGAGGTTGAACCC 20948406 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | ||| | | |||| || || | || || || || || || | || Sbjct 20948407 TCGGATACGATAGAAAAGGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 20948466 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||| ||||||| | || ||||| || ||||| || | | || | |||||| Sbjct 20948467 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTAC 20948526 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||| || |||||| |||| || ||||| ||||| Sbjct 20948527 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 20948561 >seq96 Length=8018273 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGT-------CGACGTCGA 40742 ||||| || || || || || || | |||||| || || ||| | ||| ||||| Sbjct 7717166 ATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACTATTACCCTTGAGGTCCGAGGTCGA 7717107 Query 40743 AGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGC 40802 | ||| |||| | | | | |||| | ||||| | || || |||||||| || | Sbjct 7717106 ACCCAGTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGCATTCCACC 7717047 Query 40803 GGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 40862 |||||||| || || || | || ||||||||||| || || | ||||| || || Sbjct 7717046 TGACCAGCAGCGTCTGATATTTGCAGGCAAACAGCTCGAGGATGGCCGCACTCTTTCAGA 7716987 Query 40863 CTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||| || | || ||||| || ||| | || |||| || ||| Sbjct 7716986 TTACAACATCCAGAAATAGTCTACCCTGCACCTGGTGCTTCGTGTGAGAGGTGGC 7716932 >seq158 Length=4245986 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || |||||||| ||||| || || |||||||| |||| || ||| || Sbjct 3727621 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCC 3727680 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | ||| | |||| || || | || || || || || || | || Sbjct 3727681 TCGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3727740 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||| ||||||| | || ||||| || ||||| || | || | |||||| Sbjct 3727741 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGAGATACTTTGTCTGACTAC 3727800 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||| || |||||| |||| || ||||| ||||| Sbjct 3727801 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 3727835 >seq102 Length=7754592 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||| ||||||| |||| ||| || |||||||| |||| || || || Sbjct 7635762 AAGATGCAGATGTTCATAAAAACCCTCATGGGGAAGACCATCACTCTCGAGGTTGACCCC 7635821 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | ||| | |||| || || | || || || || || || | || Sbjct 7635822 TCGGATACAATAGAAAATGTGAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 7635881 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||| ||||| | | || ||||| || ||||| || | || || | |||||| Sbjct 7635882 CAGCAAAGACTCGTTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 7635941 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||| || |||||| |||| || ||||| ||||| Sbjct 7635942 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 7635976 >seq22 Length=23169006 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || || |||||| | || ||||||||||| || || || || || || |||||| ||| Sbjct 2781357 GAACCACTGCTGAGAGAAAACCCCCGCCGCTTTGTCATCTTTCCTATCGAATACCATGAC 2781416 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| ||||| || || || |||||||| || ||||| | |||||||| Sbjct 2781417 ATTTGGCAAATGTATAAGAAAGCGGAGGCGTCTTTTTGGACGGCTGAGGAGGT 2781469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515169011209680