Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq223 215 4e-51 seq283 100 2e-16 seq12 95.1 8e-15 >seq223 Length=2232465 Score = 215 bits (238), Expect = 4e-51 Identities = 518/773 (67%), Gaps = 8/773 (1%) Strand=Plus/Minus Query 96898 TAAACAGCCATGGGCATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCA 96957 |||| |||||| |||||| ||| | || | | || || ||| | ||| ||| Sbjct 1613164 TAAATAGCCATTTCCATTTTAATGGTTGGATGCTGATTGTAACCTTCAATCTTAAAGTCT 1613105 Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGC 97017 | ||||| ||||||||||| | ||| |||| | || || | || ||||| Sbjct 1613104 TCAGCTTTGAAATCATCAATTGTCTCAACTTTTCAAAGGATTTTGAGCTTCGGAAAAGGT 1613045 Query 97018 CTGGGAGTTCGCGTAAGCTGC-TCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGC 97076 || || || | |||||| ||| | || | || | |||||||| ||||| || || Sbjct 1613044 CTTGGTTCTCTCTGAAGCTGAATCT-TCAGCGGCTCCACGTGATTCAGGTAAATATGTGC 1612986 Query 97077 ATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACA 97136 |||||| ||||| || | ||| || || || | | |||||| || | |||| | | Sbjct 1612985 ATCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGACCAGTGATGTGCGTGATCTTGTA 1612926 Query 97137 AGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCT 97196 || | || || ||||| |||||||| || ||||| || || ||| | || |||| Sbjct 1612925 CGTGAGCAGGGAGTAGCTGGCAATGTTGAACGGCACACCCAGGCCCGTGTCTCCTGACTG 1612866 Query 97197 TTGATATAACTGACAGGAAAGCTTTCCAT-CACACACATAAAACTGACTCAATACATGAC 97255 || || | ||| | || || | || | ||| ||| || ||||| | || |||| | Sbjct 1612865 CTGGTACAGCTGGC-GGTCAGTTCACCGTTCAC-CACGTAGAACTGGCAGAAGGCATGGC 1612808 Query 97256 AGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTC 97315 | || || | | ||| |||| |||| |||||||||| ||| | ||||||| Sbjct 1612807 ACGGAGGTAGTGTCATCAGAGGAAGATCTTTTGGGTTCCAAGCACGCATGATGATTCTTC 1612748 Query 97316 TATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTC 97375 | || ||||| || | ||||||| ||| | | || ||||| | ||| |||| | Sbjct 1612747 TGTCATCAGGGTTGGTTTTGATGGTATCAATCACTTTCTGCAATTGGT-AACTCCTTGAC 1612689 Query 97376 CACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCAT 97435 | ||||| | | | ||| ||||||||||||||||||||||| ||||| |||| Sbjct 1612688 CTGAATAATCTGAATCCATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAGCCAT 1612629 Query 97436 AAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACC 97495 |||| | |||| ||| ||||||||||| | | || || || |||| ||| || | Sbjct 1612628 AAACTAGGCCAAAGTCACCTTCTTCTCTTTTGGATAATCCCAGGCTATCCAAAAAGTCTC 1612569 Query 97496 TAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTT-GCTGTCAGTA 97554 |||||| |||||||| || | ||| || | | |||||||| ||| | || Sbjct 1612568 GGTGTCCATTGGCATCCCAGATTTTCACTCCTTTGGAAGATAGCTCTTTAGCTTTT-GTG 1612510 Query 97555 GATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTT 97614 ||||| |||||||||||| ||| || |||| |||||| |||| || || | || ||| Sbjct 1612509 GATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAACACACATTTGGTT 1612450 Query 97615 GTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCATTCCAAAAAC 97667 || | || ||||| || | || |||||| | | |||||| ||||| || Sbjct 1612449 GTCAGCAGTGGAAATTCATCTTTCCGGCTGTAGCGGGCCTGCATGCCAAACAC 1612397 >seq283 Length=1095284 Score = 100 bits (110), Expect = 2e-16 Identities = 202/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 97051 TCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACT 97110 ||||||||||||| ||||| | |||||||| ||||| || | ||| || || || Sbjct 231072 TCAATGTGATTCAGGTAAATATATGCATCTCCCAAAGTATGTACAAAGTCACCTGGCTTC 231131 Query 97111 AAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGC 97170 | | | ||||| || | ||||||| | || | || || | || || ||||| || ||| Sbjct 231132 AGACCGGTGACGTGTGAGATCATATAGGTGAGCAGGGAGTGACTGGCCATGTTGAATGGC 231191 Query 97171 ACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCA-TCACA 97229 | || || || || || |||| || || | ||||||||| |||| ||| |||| Sbjct 231192 AAGCCCAGGCCTATGTCTCCTGACTGCTGGTACAGCTGACAGGATAGCTCACCAGTCACC 231251 Query 97230 CACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289 | | | ||||| | | ||||| | | |||| |||||| || |||||| Sbjct 231252 CTGA-AGAACTGGCAAAGGGCATGATACGAAGGCAGCGCCATCAGAGGTACATCTTTTGG 231310 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAAT 97346 ||||||||||| | | |||||||| | | |||||||| | ||||||| ||| Sbjct 231311 GTTCCAAGCACATGTGATGATTCTTCTGTTGTCAGGGTTTGTTTCAATGGTATCAAT 231367 >seq12 Length=32490354 Score = 95.1 bits (104), Expect = 8e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| ||||||||||||||||| ||||| |||||||| || || | ||| ||||||||| Sbjct 30589929 TATTCGGCTCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCACCTTCTTCT 30589870 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || | |||| || || |||| ||| || | || ||||| |||||||| || | | Sbjct 30589869 CTTTTGGAGAATCCCAGGCTATCCAAAAAGTCTCGGGACCCATTGGCATCCCAGATTTTC 30589810 Query 97522 ACACC 97526 || || Sbjct 30589809 ACTCC 30589805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346751063431010