Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq21 91.5 2e-13 seq51 87.8 3e-12 seq46 84.2 3e-11 >seq21 Length=25602908 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAA-ACTATAACTATAGAGATTGAAGCAAA 124597 ||||| |||||| ||| || || | || || || || ||| | ||||||||| | Sbjct 20609672 ATGCAGATATTTGTAATAACCCTTATGGGGGAAGACCATCACTCTCGAGATTGAACCCTT 20609731 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| ||| | || || || || ||||||||||| || || |||||||| Sbjct 20609732 GGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGATCA 20609791 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| || |||||||| || || ||| | || ||| | || || | || || || Sbjct 20609792 GCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTGTGTCTGACTACAA 20609851 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 |||||||| || || ||| | || | || ||| | | || |||||| ||| || Sbjct 20609852 CATTCAAAAGGAGTCCACTCTTCACCTTGTATTAAGACTTCGTGGTGGTGCTAAGAA 20609908 >seq51 Length=12882142 Score = 87.8 bits (96), Expect = 3e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || ||||| | || || ||||| || || || | ||| | || | | Sbjct 9170329 AATGCAAATCTTCATAAAAAGCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 9170388 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || ||| | || || || ||||||||||||||||| || ||||| || Sbjct 9170389 TGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAAGGTATCCCTCCTGACCA 9170448 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| || || || || || ||| || | || | || || || Sbjct 9170449 GCAGAGGCTCATCTTTGCTGGCAAGCAGTTTGAAGATGGTGGTACTCTTTCTGACTACAA 9170508 Query 124718 TATTCAAAAAGAATCAAC 124735 ||| || ||||| ||||| Sbjct 9170509 TATCCAGAAAGAGTCAAC 9170526 >seq46 Length=13992998 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || |||| || || || ||||| || || || | ||| | || | | Sbjct 3037906 AATGCAAATCTTCGTAAAAACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 3037965 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| | || || || || ||||||||||| || || || || || Sbjct 3037966 TGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGGATCCCTCCCGACCA 3038025 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || |||||||| || || | |||||| |||| || | || || || Sbjct 3038026 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTACAA 3038085 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| ||||| | || |||| | || | | |||||||| Sbjct 3038086 CATCCAGAAAGAGTCAACCCTCCACCTGGTCCTGCGCCTGAGGGGTGGTAT 3038136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755382409142400