Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq96 118 9e-22 seq63 100 2e-16 seq25 96.9 3e-15 seq27 95.1 1e-14 seq46 91.5 1e-13 seq158 87.8 2e-12 seq6 84.2 2e-11 >seq96 Length=8018273 Score = 118 bits (130), Expect = 9e-22 Identities = 156/217 (72%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | ||||||| ||| || ||||||||||| | |||||| |||||| Sbjct 7716950 CACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCCTC 7717009 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||||||| || || | || ||||||||||| || || || ||||||||||| ||| Sbjct 7717010 GAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTATCTTG 7717069 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCG-------ACGGTCA 118701 ||||| ||| || | || | |||||| || ||||||||| | ||| | Sbjct 7717070 GATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCGACCTCGGACCTCAAGGGTAA 7717129 Query 118702 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| |||| || || ||||| |||||||| Sbjct 7717130 TAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 7717166 >seq63 Length=11284890 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| ||| ||||||| |||||||||||||| | |||| | || ||| Sbjct 6709661 CACCAGGTGCTGGGTAAACTCTTTCTGAATGTTGTAATCTGAAAGAGTGTGGCCATACTC 6709602 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||| ||||| || || | || |||| |||||| || || ||||||||||| ||| Sbjct 6709601 GAGTTGTTTACCTGCAAATATCAGACACTGCTGGTCATATGGAATGCCCTCCTTATCTTG 6709542 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | | || |||||| || ||| ||||| | | | || || Sbjct 6709541 GATTTTGGCTTTGACATTCTTGATGGTGTCACTGGGCTCAACCTCAAGGCAGATGGTCTT 6709482 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| || || ||||| |||||||| Sbjct 6709481 GCCTGTCAGGGTGTTCACAAAGATCTGCAT 6709452 >seq25 Length=21972308 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | ||| ||||| | || | || ||||| |||||||||||||| || Sbjct 20948577 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 20948518 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| | ||| || || || || ||||| | ||||| | |||||||| ||||| Sbjct 20948517 CAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGG 20948458 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||| || || || || |||| ||| | || |||| | || || Sbjct 20948457 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAAC 20948398 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| | || | || || || || || |||||||||||||||||||| Sbjct 20948397 CTCAAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 20948350 >seq27 Length=20685099 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| || ||||| || || |||||||||| | |||||||| |||||| Sbjct 20118078 CACCAGGTGTGAGGTGGACTCCTTCTGGGTGTTGTAATC--TGATAGTGCGGCCATCCTC 20118021 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||||| || || | || ||||| ||| || || | ||||||||||| ||| Sbjct 20118020 AAGCTGTTGGCCTGCAAATATCAGACGTGCCTGGTCAGGTGAGATGCCCTCCTTATCTTG 20117961 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| || ||| | ||| | ||||||| | || |||||| | ||| | || | Sbjct 20117960 GATTTTGAATTCAACATTTTCAATGGTGTCCCTTGGCTTGACCTCAAGGGTGATGGTCCT 20117901 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCA 118737 ||| |||| || || ||||| ||||||| Sbjct 20117900 GCCCTTCAGGGTATTCACAAAGATCTGCA 20117872 >seq46 Length=13992998 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||||||| || || ||||| || | ||| || ||| || Sbjct 3038590 ACCAGGTGCAGGGTTGACTCTTTCTGGATATTGTAGTCAGAAAGAGTACGACCATCTTCA 3038531 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| ||||||| | |||||| |||||||| || || || || ||| Sbjct 3038530 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATACCTTCTTTATCTTGG 3038471 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| || ||| ||||| | ||| | || ||| Sbjct 3038470 ATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTG 3038411 Query 118710 CCGGTCAGAGTTTTTACAAA 118729 |||||||| || || ||||| Sbjct 3038410 CCGGTCAGGGTCTTCACAAA 3038391 >seq158 Length=4245986 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582 ||| ||||| | || | || ||||| |||||||||||||| || || ||| Sbjct 3727839 TCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCTCC 3727780 Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 ||| || || || || ||||| | ||||| | |||||||| ||||| || || ||||| Sbjct 3727779 ATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 3727720 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 || || || || || | ||| | || |||| | || ||||||| || | Sbjct 3727719 ATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAT 3727660 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||||||||||||||| Sbjct 3727659 GGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 3727624 >seq6 Length=46294980 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/218 (69%), Gaps = 16/218 (7%) Strand=Plus/Minus Query 118523 TCTCAA--CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 |||||| ||||| || | |||| ||||| || ||||||||||| | |||| | Sbjct 41518347 TCTCAAAGCACCAGGTACAGGCTAGATTCTTTCTGGATGTTGTAATCTGAAAGAGTGTGG 41518288 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 ||| |||| |||||| || || | || |||| |||||| || || || ||||||| Sbjct 41518287 CCATCTTCGAACTGTTTGCCTGCAAATATCAGACACTGCTGGTCAGGTGGAATGCCCT-- 41518230 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 ||| || | | |||| |||| |||||| || ||| ||||| | ||| Sbjct 41518229 TTGGCTTTGACATTTT-------CTGT-----GGTGTCACTGGGCTCAACCTCAAGGGTG 41518182 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || ||||| ||||| || || ||||| |||||||| Sbjct 41518181 ATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 41518144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433789196008756