Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq46 105 8e-18 seq227 100 3e-16 seq223 100 3e-16 seq99 100 3e-16 seq16 100 3e-16 seq7 98.7 1e-15 seq96 95.1 1e-14 seq65 82.4 9e-11 seq25 82.4 9e-11 >seq46 Length=13992998 Score = 105 bits (116), Expect = 8e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 11043557 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 11043498 Query 60124 TATACTACCGAGGATTGA 60141 ||||||| |||||| ||| Sbjct 11043497 TATACTAACGAGGAGTGA 11043480 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || ||||| |||| ||||| || | || || |||||||| || || || Sbjct 3038098 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAA 3038039 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||||| || | | || || ||| ||| || || | | Sbjct 3038038 GATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTATCCTGGATCTTGGCCTTCACATT 3037979 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || | ||||| || | |||||||| ||||| || || || ||||| Sbjct 3037978 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTAC 3037919 Query 43172 AAAGATTTGCATTTTTAC 43189 |||||||||||||| || Sbjct 3037918 GAAGATTTGCATTTTGAC 3037901 Score = 82.4 bits (90), Expect = 9e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || |||||||| |||| ||||| || | || || |||||||| ||||| || Sbjct 3038573 CTCTTTCTGGATATTGTAGTCAGAAAGAGTACGACCATCTTCAAGCTGCTTGCCAGCAAA 3038514 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||||| || | | || || || ||| || || | | Sbjct 3038513 GATGAGCCTCTGCTGGTCGGGAGGGATACCTTCTTTATCTTGGATCTTGGCCTTCACATT 3038454 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || | ||||| || | |||||||| ||||| || || ||||| || Sbjct 3038453 CTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 3038394 Query 43172 AAA 43174 ||| Sbjct 3038393 AAA 3038391 >seq227 Length=2111159 Score = 100 bits (110), Expect = 3e-16 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| |||||||||||||||||| || ||||||||||| Sbjct 1634856 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGTGGGGATACTCACCAC 1634797 Query 60124 TATACTACCGAGGATTGA 60141 ||||||| |||||| ||| Sbjct 1634796 TATACTAACGAGGAGTGA 1634779 >seq223 Length=2232465 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1724608 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1724549 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 1724548 ATACTAACGAGGA 1724536 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1798796 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1798855 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1798856 TACTAACGAGGA 1798867 >seq99 Length=7922563 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 5200892 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5200951 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 5200952 TACTAACGAGGAT 5200964 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 5194331 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5194390 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 5194391 TACTAACGAGGA 5194402 >seq16 Length=30363061 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 29681351 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 29681410 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 29681411 ATACTAACGAGGA 29681423 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 29746433 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29746492 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 29746493 TACTAACGAGGA 29746504 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 29752252 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29752311 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 29752312 TACTAACGAGGA 29752323 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 29767824 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29767765 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 29767764 TACTAACGAGGA 29767753 >seq7 Length=42659167 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 24023600 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 24023659 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 24023660 TACTAACGAGGA 24023671 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 21897190 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 21897249 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 21897250 ATACTAACGAGGA 21897262 >seq96 Length=8018273 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/234 (69%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| |||| || || || || || |||||||| | Sbjct 7716933 CCACCTCTCACACGAAGCACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCTGAA 7716992 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || ||||| || || || ||||| || ||||||||||| | || Sbjct 7716993 AGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTGGA 7717052 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || |||||| || |||||| ||||| || | | ||||| || | ||| || Sbjct 7717053 ATGCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCGACC 7717112 Query 43137 TC-GACC------GTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| || || || |||||| | || ||||| |||||||| ||||| Sbjct 7717113 TCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 7717166 >seq65 Length=11138919 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| |||||||||| |||| ||||| ||||| |||||| Sbjct 8509527 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCATGACGGGCGGGGATACTAACCACT 8509468 Query 60125 ATACTACCGAGGA 60137 |||||| || ||| Sbjct 8509467 ATACTAACGGGGA 8509455 >seq25 Length=21972308 Score = 82.4 bits (90), Expect = 9e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42972 AACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCA 43031 ||||| | ||| | ||| |||||||||||| ||||| |||| || ||| | | || Sbjct 20948561 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCT 20948502 Query 43032 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 || || ||||| ||||| || ||||||| ||||| || | || | | ||||| ||| Sbjct 20948501 TCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 20948442 Query 43092 ATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 ||| || || | | | | | ||| || | ||| || || | |||||||| Sbjct 20948441 TGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACCTCAAGAGTGATGGTC 20948382 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || || || || || |||||||| || ||||| || Sbjct 20948381 TTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 20948347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571761897818040