Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq118 266 3e-66 seq126 257 2e-63 seq4 102 8e-17 seq22 98.7 9e-16 >seq118 Length=6727830 Score = 266 bits (294), Expect = 3e-66 Identities = 594/885 (67%), Gaps = 39/885 (4%) Strand=Plus/Plus Query 15908 AACACATTATCTTTTTTATTTGACATAACTGACATTTTTTGATATTCACTAACTCTCTTT 15967 || ||||||||| | | | || ||||| | | | ||| || || || || || Sbjct 3435562 AAGACATTATCTATGGTTTCTGCCATAATAGCAAAATGTTGGTACTCTGAAATTCATTTC 3435621 Query 15968 TCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTT 16027 ||||||||||| |||||||||| || ||||||||||||||||||||||| ||||||| | Sbjct 3435622 TCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAAGGGATTTTCT 3435681 Query 16028 GAAC--AATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTA 16085 | || | || | | |||| | ||| | | |||||| | |||||||| || Sbjct 3435682 GCCTGGAAAACCTTTGA--GAATCCAAGTTCTACAAGTAATCTGTTAGCCACAAACTCAG 3435739 Query 16086 TATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTA 16145 |||||||| |||| ||| ||| |||||||| | | ||| || | |||||||||| Sbjct 3435740 TATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAGCTTCTGTTA 3435799 Query 16146 AAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACACTATT-TAAC 16204 |||| | | || || || || || ||||| || || || || ||| | || || | | Sbjct 3435800 AAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACT-CTCTCTTCTGAA 3435858 Query 16205 GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCC 16264 || |||| |||| | ||| || | ||||||| ||||| |||| ||||| || Sbjct 3435859 GGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAGACCTTCATCT 3435918 Query 16265 CTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAA 16324 || || || | || || ||||| || || || | ||| || ||| || || | | | Sbjct 3435919 CTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTTCTTTAGCTAG 3435978 Query 16325 AATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAAT 16384 |||||||| ||||| || || || ||||| || | ||| || || ||||| || |||| | Sbjct 3435979 AATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAAGGCCACCACT 3436038 Query 16385 CGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaatttgctttttgt 16444 | || || | || ||| || | |||||||| | ||||| |||||||| Sbjct 3436039 CTTTCCCCCAAAGTAGATTTTATATCTGCTATCCATCACAAGGTCCAATCTGCTTTTTTC 3436098 Query 16445 ttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAA 16504 | |||||| ||| | || || ||||||||||| ||| ||| ||| |||| Sbjct 3436099 TGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTTGGGATCT--G 3436156 Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || ||||| ||| |||| ||||| ||||| ||||| |||| |||||| || || || Sbjct 3436157 ATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAACATTCTCGATGAGAATTTGT 3436216 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTA-CTTCAGAGTAAAACCTTTCTGCTAA 16623 |||| ||| ||| | || | || | || | | ||| | Sbjct 3436217 GAACC---------TCT------GGA-ACCTGCACCTCCTGACTGACACC--------AC 3436252 Query 16624 GTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtt 16683 |||||| || | |||||||| || ||||||||||| || | ||||| | ||| Sbjct 3436253 GTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGACCCAATA 3436312 Query 16684 tttttCGTTATCTGA---AAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTC 16740 ||| || |||||| ||| || ||||| || | |||||||||||| || ||||| Sbjct 3436313 TTTCTC---ATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATAAGTCAACCTC 3436369 Query 16741 TTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCA 16785 |||| | ||||| || || || ||| ||| || ||||||| Sbjct 3436370 TTCTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCA 3436414 >seq126 Length=6050536 Score = 257 bits (284), Expect = 2e-63 Identities = 624/938 (67%), Gaps = 18/938 (2%) Strand=Plus/Plus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||| || ||| ||| | | ||| ||| ||| || | ||||||| ||| ||| Sbjct 4678229 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 4678288 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 | ||||||| | |||||||| |||||||| || || ||||| || | |||||||| | Sbjct 4678289 TCTGATATTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAATATCCT 4678348 Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATA 16064 ||||||| ||||| ||||||| | | | || | | | |||| ||||| || | Sbjct 4678349 CCATAAAGTCAAACGGATTTTCTACTCTGAAAACCTTGTGGAAACCCAGTTCCAGCATAA 4678408 Query 16065 ATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATT 16124 | | |||||||| || || || | ||| |||||||| ||| ||| || || | | Sbjct 4678409 GTGTGTCCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAATGAGCT 4678468 Query 16125 TAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATAT 16184 | |||| | || || || | || | | | ||| |||| || | ||||| | Sbjct 4678469 TCCCAGGCAAGGCCTCAGTGAGGAACTCCTGTCCTAGCCTAACAGCACTGGTCATTATTT 4678528 Query 16185 CTCTTACTACACTATTTA-ACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAA 16243 || ||||| | || | |||| || | | |||||| | ||| | || ||||| Sbjct 4678529 CTTTTACT-CTCTGCTCCGACGGTTTGTGTCCCAGGTGTTTGAGCATCAGTCAGGCAAAG 4678587 Query 16244 TCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATT 16303 ||||| || || || || || || || || | || || |||||||| | || ||||| Sbjct 4678588 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG-CCAGGCATC 4678646 Query 16304 AGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCA 16363 ||||||||||| || | ||| ||||| | |||||| ||||||||||| || || ||||| Sbjct 4678647 AGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTCC 4678706 Query 16364 ACTGCGGCAAATGCAACCAATCGCTCACCGTACGT--TCTAtttttactttctatccatt 16421 ||||| ||||| || || | || || || || || || ||| | | | ||||| Sbjct 4678707 ACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCC--CCAATCCAAC 4678764 Query 16422 ttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAAT 16481 |||| | ||| || | || ||||| ||| | || || ||||| || | | Sbjct 4678765 GCAAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAGAA 4678824 Query 16482 AAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAAT 16541 | | |||||| | |||| ||| ||||| || || || | |||||||||||| |||| Sbjct 4678825 ATTCCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAAT 4678884 Query 16542 GAATATTCTCCATTGCTATCTGAAAA---------CCATAAAAGCATCTAGCTTCGGATA 16592 |||| || ||||| || || || || | ||| || || | || || | | Sbjct 4678885 GAATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCTCTGTAA 4678944 Query 16593 TTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTG 16652 | || ||||| | ||| | ||| | |||||||| || ||||| ||||| || |||| Sbjct 4678945 TCTGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTG 4679004 Query 16653 CAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTT-ATCTGAAAGTTTTAACCAG 16711 | ||||| || || | ||| || || | | | || || || ||| || |||| Sbjct 4679005 CGAAAAAAGCCAGAACATGTGATATGAAGTATCTCTCTTTGGGCTTCAAG-GTTGCCCAG 4679063 Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTT 16771 | || || || || | ||| ||||| || | ||||| ||||| | | || || Sbjct 4679064 TGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACCTCCGCTTTC 4679123 Query 16772 TTATACATTTTCCATATGTCTTCGTAAACAATAGGAAA 16809 |||||||||| ||| ||||| | ||| | |||||||| Sbjct 4679124 TTATACATTTGCCAAATGTCATGGTATTCGATAGGAAA 4679161 >seq4 Length=47749213 Score = 102 bits (112), Expect = 8e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||||||||| ||| | || || ||||||||| | | | | |||||| | | Sbjct 24680844 TTTAAAAATCTGCATCCAAAGTGAAGACATTATCTGTGGTTTCCGTCATAACAGCAAAAC 24680785 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 ||| || || ||||| || ||||||||||| |||||||||| ||| ||||| |||| Sbjct 24680784 GTTGGTACTCTGAAACTCGTTTCTCAAAGAAATTCGTTTTTCCTTGTAAAGAAATGTTTT 24680725 Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028 ||||||||||||||||||||| || Sbjct 24680724 CCATAAAATCAAAAGGATTTTCTG 24680701 >seq22 Length=23169006 Score = 98.7 bits (108), Expect = 9e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || || || || | || || |||||||| || || ||||| ||||||||||| || Sbjct 2785904 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2785845 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| ||||| | ||||| |||||||||||||| || ||||| ||||| ||||| || Sbjct 2785844 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGGCT 2785785 Query 16379 AC 16380 || Sbjct 2785784 AC 2785783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462466945549800