Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq11 1550 0.0 seq6 129 4e-25 seq26 89.7 4e-13 seq25 87.8 1e-12 >seq11 Length=36342412 Score = 1550 bits (1718), Expect = 0.0 Identities = 1319/1622 (81%), Gaps = 34/1622 (2%) Strand=Plus/Plus Query 107158 TGAGGATATTTGTCTATAGAAGACATCTATCTTTAC----CATCACTCTGGAGTTGAACT 107213 ||||| ||||||| |||||| || | ||| | ||||||| | | ||||||| Sbjct 11985345 TGAGGGTATTTGTGGGGAGAAGAAATACGTTTTTCCTCCCCATCACTTTAGGATTGAACT 11985404 Query 107214 TGATGTTC-TGG-----ATTAGTTTGTAATTAAAGGCATTTTGTTCTGTCCAAGGATCTC 107267 |||||||| ||| ||||| ||||||| | |||||||||||||||||||||||| Sbjct 11985405 TGATGTTCCTGGGAATGATTAGATTGTAATCAGAGGCATTTTGTTCTGTCCAAGGATTCT 11985464 Query 107268 CTCCTCCACCTTGCCTGTGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGG 107327 | |||| |||| ||| ||||| |||| ||| || ||| | ||| || |||| | Sbjct 11985465 TTGCTCCTCCTTCGCTGGGCCCAGGCTCTGCTGGTCCCCCGTTCCAGGATGATGATTACA 11985524 Query 107328 TGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTG 107387 |||| || || || |||| | ||| | |||||||||||||||||||||||| ||||| Sbjct 11985525 TGGAGGA-GA--CTCTGCCAGCAGCATTACCTGTGGGCCCTGGGCTGCTATATGTTGCTG 11985581 Query 107388 GCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTG 107447 ||| | ||| |||||| |||||| ||||| || |||||||| || | |||| ||| Sbjct 11985582 GCCATAGTTGCTCTGAAACTTTCTCTCAGATTAAAATGTGACCCTGAACACATGGACCTG 11985641 Query 107448 GAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTG 107507 |||||||||| ||||| || |||| ||||||||| || |||||||| | | |||||||| Sbjct 11985642 GAGTCCAGGGGATTCCAAAGCCAGCGCTGTAGGGATATCTTGTACAAGACCTTGAAGCTG 11985701 Query 107508 CCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTC 107567 ||||||| ||| |||||||||||||| ||| |||| ||||||||||||||||| ||| | Sbjct 11985702 CCAGCAAGGAGCTCCATCAACTGTTCAGGGGTCACCCGAGGGGACCAGGAAGCTGTGTTG 11985761 Query 107568 CAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTAT 107627 |||||||| || || |||||||| | ||||| |||||| |||||||| | ||| | Sbjct 11985762 CAGGCCCTTCTGGAAAACCTGGAGATCAAGAAGAAGCGGGAACCTCTCACAGACACAGAC 11985821 Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTC 107687 |||||| | | ||||||||||||||| |||||||||| |||| |||||||||||||| Sbjct 11985822 TACCTCTCCCTGACCAGAGACTGTGAGAACTTCAAGGCCAAAAGAAAGTTCATACAGTTT 11985881 Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 |||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct 11985882 CCACTGAGCAAAGAAGAGCTAGACTTCCCTATTGCCTACTCTATGGTGGTTCATGAGAAG 11985941 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||||||| ||| ||||||| ||||| |||||||||||||||||||| ||||||||| Sbjct 11985942 ATTGAAAACTTCGAAAGGCTGCTACGAGCTGTGTATGCCCCTCAGAACATCTACTGTGTC 11986001 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 |||||||||| |||||||||||| ||||||||||| |||||||| || |||||||| ||| Sbjct 11986002 CACGTGGATGAGAAGTCCCCAGAAACTTTCAAAGAAGCGGTCAAAGCTATTATTTCATGC 11986061 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| ||||||||||||| |||||||| |||| || ||||||||||| ||||||||| | Sbjct 11986062 TTCTCCAATGTCTTCATTGCCAGTAAACTGGTTCCAGTGGTTTATGCATCCTGGTCCCGG 11986121 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct 11986122 GTGCAGGCTGACCTGAACTGCATGGAAGATTTGCTCCAGAGCTCAGTGCCATGGAAATAC 11986181 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047 || |||||||| || ||||||||||| || |||||||||||||||||||||||| |||| Sbjct 11986182 TTCCTGAATACCTGTGGGACAGACTTTCCACTAAAGACCAATGCCGAGATGGTCCAGGCC 11986241 Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaa 108107 || ||||||||||| || | |||||||||||| || || ||||| |||||||||||||| Sbjct 11986242 CTGAAGATGTTGAATGGGAGGAACAGTATGGAATCCGAAATACCTCCTGAGTCCAAAAAA 11986301 Query 108108 aaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAG 108167 | ||||||||||| | ||| ||||| | ||||||| ||||| || | ||||| |||| Sbjct 11986302 CAGCGCTGGAAATATCACTACGAGGTAAGAGACACATTGTACATCACAAACAAGAAGAAG 11986361 Query 108168 GACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGA 108227 || |||||||| ||||| || | |||||||| |||||||||||| ||||||| || ||| Sbjct 11986362 GATCCTCCCCCCAATAATGTAACTATGTTCACGGGGAATGCCTATATTGTGGCTTCCCGA 11986421 Query 108228 GCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAA 108287 | ||| ||| |||||||||| | ||||| ||||||||| |||| | |||||||| ||| Sbjct 11986422 GACTTCATCCGACATGTCTTAAAGAACCCCAAATCCCAACAACTGATCGAATGGGTAAAA 11986481 Query 108288 GACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCT 108347 ||||| |||||||| || || |||||||||||||| ||||||||||| | ||||||||| Sbjct 11986482 GACACGTATAGCCCTGATGAGCACCTCTGGGCCACACTTCAGCGTGCACGATGGATGCCT 11986541 Query 108348 GGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTC 108407 || ||| |||| ||||| ||||| | ||||||||||||||||| |||| ||||| || Sbjct 11986542 GGATCTTTTCCCTACCACCACAAGTTTGACATCTCAGACATGACTTCCATTGCCAGACTG 11986601 Query 108408 GTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCT 108467 || ||||||||| || |||||||| ||| | |||||| || ||||| || |||||| Sbjct 11986602 GTTAAGTGGCAGGGTCATGAGGGAGACATCAATAAGGGGGCACCGTATGCGCCTTGCTCT 11986661 Query 108468 GGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAG 108527 |||||||| | |||| | ||||| ||||| || |||||||||||| ||||||| || || Sbjct 11986662 GGAATCCACCAGAGGACTATCTGTATTTATGGAGCCGGGGACCTGCACTGGATGCTTCAA 11986721 Query 108528 AACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGC 108587 ||||||||||| ||||| |||||||||||||| | ||| |||||||||| || |||||| Sbjct 11986722 AACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGATGATAACGCTCTTCAGTGC 11986781 Query 108588 TTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTGAACTTTGAG----------- 108636 |||||||||||| |||| |||||||||||||| || |||||||| |||| Sbjct 11986782 TTAGAAGAGTACTTACGACATAAGGCCATCTACGGCACTGAACTCTGAGACACAATATGA 11986841 Query 108637 -----CTGC-AC---TGTGGGCCAGGGACTGTGCCAACATGCCCAGGGCGTACTGGTACT 108687 ||| || || |||| || | |||||| ||||||||||| | |||| || Sbjct 11986842 GAAAATTGCTACTTGTGGGGGCAAGAGCCTGTGCAAACATGCCCAGAATTTCCTGGGACA 11986901 Query 108688 GTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGG-GCTG 108746 |||||||||||| ||| |||||| |||||||| ||| ||||| ||| | || || |||| Sbjct 11986902 GTGTGGGGTGGGAGACCAGGGCTTTGGAATCCCTGGTGTCCCCTAGGTTGAGGGGTGCTG 11986961 Query 108747 CT 108748 || Sbjct 11986962 CT 11986963 >seq6 Length=46294980 Score = 129 bits (142), Expect = 4e-25 Identities = 567/884 (64%), Gaps = 25/884 (3%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || || ||||||||| | || || || ||||| || || ||||| ||| | || Sbjct 34722885 CCCCTTAGCAAAGAAGAGGCGGGGTTTCCAATAGCCTATTCTATCGTGGTTCATCACAAA 34722944 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 || |||| | || |||| ||| | ||| | ||| |||||||| | || || || Sbjct 34722945 ATCGAAATGCTCGACAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCATC 34723004 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || ||||| || || || | ||| || ||||| | || |||| ||||| Sbjct 34723005 CATGTGGACAGAAAATCAGAGCAGCCCTTCCTAGCTGCGGTGATGGGCATTGCATCCTGT 34723064 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| |||||||| |||||||| | |||| ||||||||||| || ||| | | Sbjct 34723065 TTCAATAATGTCTTTGTGGCCAGTCAATTGGAGAGTGTGGTTTATGCATCATGGAGCCGG 34723124 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGC--CATGGAAGT 107985 || || |||||||| ||||| ||| | ||| | | |||| | |||| ||||||| Sbjct 34723125 GTTCAGGCTGACCTCAACTGCATGAAGGACCTTC-ACAGA-ATGCGTGCAGACTGGAAGT 34723182 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 |||| | ||| ||||| | || || ||||| || ||||| || || ||| | Sbjct 34723183 ACTTGATAAATCTTTGCGGTATGGATTTTCCCATCAAAACCAACCTAGAAATCGTCAGGA 34723242 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCC--aa 108103 |||||| ||| | |||| |||||| | || | ||| | | | ||| || Sbjct 34723243 AGCTCAAGTCGTTCATGGGTGAGAACAACCTTGAAACGGAG--AAGATGCCACTCCATAA 34723300 Query 108104 aaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGAC---ACACTGTACCCTACCAGCAA 108160 | || | | ||||| | || |||| ||| | ||| | ||| | || | | Sbjct 34723301 AGAAGAGAGGTGGAAGAAGCGGTATGCGGTCATTGACGGAAAGCTGACCAACACGGGGAC 34723360 Query 108161 GATGAA---GGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGT 108217 |||| | | ||||| | ||| | || | ||| | || | |||||||||||| Sbjct 34723361 CGTGAAAACGCATCCTCCGCTTGAAA---CGCCTCTTTTCTCGGGCAGTGCCTATTTTGT 34723417 Query 108218 GGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGA 108277 || | | | | | ||| | || |||| || ||| ||||| | | || Sbjct 34723418 GGTCAGTAGGGAATATGTGACGTACGTGCTAGAAAATGAAAAAATCCAAAAGTTTATGGA 34723477 Query 108278 ATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCC 108337 |||| | ||||| || ||||| || || | ||||||||||| | || | | ||| Sbjct 34723478 GTGGGCGCAGGACACGTACAGCCCGGATGAGTATCTCTGGGCCACTATCCAAAG-GATCC 34723536 Query 108338 GTGGA-TGCCTGGCTC-TGTTCCT--AGCCACCCCAAGTATCACATCTCAGACATGACTG 108393 || | | |||||||| | |||| ||||| ||||| || | || |||||| Sbjct 34723537 CTGAAGTTCCTGGCTCACGCTCCTTGAGCCA---TAAGTACGACTTGTCCGACATGCTCT 34723593 Query 108394 CCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTT 108453 | | || ||| | ||||||||||||||| | ||||| ||| | ||| || || | Sbjct 34723594 CGGTGGCGAGGTTTGTCAAGTGGCAGTACTATGAGGGGGATACTTCTAAGGGCGCTCCCT 34723653 Query 108454 ATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGT 108513 | |||||||| | || | ||| | | | | ||| | | ||| || || |||||| Sbjct 34723654 ACCCACCCTGCACGGGGACCCACGTGCGCTCGGTGTGCGTGTTCGGCGCTGGAGACCTGA 34723713 Query 108514 ACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 ||||||| || || | || ||| | || || || ||||||||| Sbjct 34723714 ACTGGATGCTGCACACGCACCACTTGTTTGCCAATAAGTTTGAC 34723757 >seq26 Length=21254048 Score = 89.7 bits (98), Expect = 4e-13 Identities = 190/281 (68%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 107749 TTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCC 107808 |||| | |||||| |||| | || ||| | || | || |||||| | |||||||| | Sbjct 7341654 TTGATACATTTGAAAGGCTCTTCCGGGCCATTTACACTCCCCAGAACCTCTACTGTGTTC 7341713 Query 107809 ACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTC-CTGC 107867 ||||||||| ||| || ||| |||||| ||| || ||| | | || | |||| Sbjct 7341714 ACGTGGATGAGAAAGCCTCAGCTGCTTTCACAGATGCTGTCG-GAAAACTACTGAGCTGC 7341772 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||||| |||| ||| |||| |||| || | ||||| || || ||||| Sbjct 7341773 TTCCCAAATGCCTTTGTGGCTTCTAAGAGGGAGTCTGTGGTCTACGCAGGAATCTCCAGG 7341832 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 | || |||||||||||||| || ||||| | || | ||| || ||||||||| Sbjct 7341833 CTCCAGGCTGACCTGAACTGCCTGCAAGACCTTGTCGCCTCCAAAGTTCCCTGGAAGTAC 7341892 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028 | || || |||||| ||| |||||| | || ||||| Sbjct 7341893 GCCATCAACACCTGCGGGCAAGATTTCCCCCTGAAAACCAA 7341933 >seq25 Length=21972308 Score = 87.8 bits (96), Expect = 1e-12 Identities = 192/284 (68%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 107749 TTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCC 107808 |||| | |||||| |||| | || ||| | || | || |||||| | |||||||| | Sbjct 11126722 TTGATACATTTGAAAGGCTCTTCCGGGCCATTTACACTCCCCAGAACCTCTACTGTGTTC 11126781 Query 107809 ACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTC-CTGC 107867 | ||||||| ||| || ||| |||||| ||| || || | | || | |||| Sbjct 11126782 ATGTGGATGAGAAAGCCTCAGCTGCTTTCACAGATGCTGTGG-GAAAACTACTGAGCTGC 11126840 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||||| |||| ||| |||| |||| || | ||||| ||||| ||||| Sbjct 11126841 TTCCCAAATGCCTTTGTGGCTTCTAAGAGGGAGTCTGTGGTCTATGCAGGAATCTCCAGG 11126900 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTC---AGTGCCATGGAAG 107984 | || |||||||||||||| || ||||| | || | ||| ||| || |||||| Sbjct 11126901 CTCCAGGCTGACCTGAACTGCTTGAAAGACCTTGTC---ACCTCCAAAGTTCCCTGGAAG 11126957 Query 107985 TACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028 ||| | || || |||||| ||| |||||| | || ||||| Sbjct 11126958 TACGCCATCAACACCTGCGGGCAAGATTTCCCCCTGAAAACCAA 11127001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348235722408882